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OPENSEQ.org
L22 - L27
UniProt: Q5SHP3 - P60493
Length: 198
Sequences: 1246
Seq/Len: 6.39
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dW0 3v2fW0Contact Map
2j002j01W0 2j03W0Contact Map
4juw4juxW0Contact Map
4kix4kixSW 4kizSW 4kj1SW 4kj3SWContact Map
4kj54kj5SW 4kj7SW 4kj9SW 4kjbSWContact Map
2zjr2zjrPTContact Map
4btc4btdW0Contact Map
3uyd3uyeS3 3uygS3Contact Map
4gd13r8sSW 3r8tSWContact Map
3knh3kniW0 3knkW0Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
37_R 10_T 0.74 0.00
9_Y 31_V 0.73 0.00
93_A 47_P 0.68 0.00
9_Y 38_V 0.67 0.00
93_A 31_V 0.66 0.00
79_G 82_R 0.66 0.00
35_I 82_R 0.66 0.00
27_K 68_E 0.64 0.00
13_S 64_D 0.62 0.00
77_D 29_Q 0.62 0.00
60_N 41_R 0.62 0.00
25_R 69_F 0.61 0.00
95_I 79_V 0.59 0.00
76_V 67_V 0.59 0.00
64_M 41_R 0.58 0.00
21_V 7_L 0.58 0.00
4_K 47_P 0.57 0.00
52_E 78_Y 0.55 0.00
94_D 33_A 0.54 0.00
10_V 10_T 0.54 0.00
34_N 81_V 0.54 0.00
102_H 62_L 0.53 0.00
60_N 21_L 0.52 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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