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OPENSEQ.org
L22 - L33
UniProt: Q5SHP3 - P35871
Length: 167
Sequences: 1115
Seq/Len: 6.88
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dW6 3v2fW6Contact Map
2j002j01W6 2j03W6Contact Map
4juw4juxW6Contact Map
4kix4kixS1 4kizS1 4kj1S1 4kj3S1Contact Map
4kj54kj5S1 4kj7S1 4kj9S1 4kjbS1Contact Map
2zjr2zjrP1Contact Map
4btc4btdW6Contact Map
3uyd3uyeS6 3uygS6Contact Map
4gd13r8sS1 3r8tS1Contact Map
3knh3kniW6 3knkW6Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
18_R 18_R 0.76 0.00
17_V 10_L 0.70 0.00
99_R 12_E 0.70 0.00
18_R 22_A 0.69 0.00
109_E 39_Y 0.69 0.00
71_V 6_R 0.67 0.00
38_Y 41_P 0.67 0.00
27_K 19_R 0.66 0.00
39_T 27_K 0.62 0.00
93_A 32_N 0.61 0.00
38_Y 50_R 0.60 0.00
67_D 46_H 0.58 0.00
90_R 33_K 0.57 0.00
72_K 45_K 0.57 0.00
15_R 8_K 0.56 0.00
4_K 7_I 0.56 0.00
94_D 12_E 0.56 0.00
107_L 44_R 0.56 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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