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OPENSEQ.org
L23 - L31
UniProt: Q5SHP0 - Q5SJE1
Length: 167
Sequences: 1239
Seq/Len: 7.94
I_Prob: 0.10
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dX4 3v2fX4Contact Map
2j002j01X4 2j03X4Contact Map
4juw4juxX4Contact Map
4btc4btdX4Contact Map
3uyd3uyeT4 3uygT4Contact Map
3ohc3ohjX4 3ohkX4Contact Map
3knh3kniX4 3knkX4Contact Map
3ohy3ohzX4 3oi1X4Contact Map
3v223v23X4 3v25X4Contact Map
3uz63uz8T4 3uz9T4Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
61_G 62_R 1.09 0.10
16_K 53_E 0.92 0.06
88_K 43_Y 0.90 0.06
29_W 62_R 0.86 0.05
70_L 3_E 0.81 0.04
9_L 15_I 0.81 0.04
17_A 48_R 0.77 0.04
11_P 34_E 0.77 0.04
21_F 34_E 0.74 0.03
47_F 17_G 0.73 0.03
33_K 32_Y 0.73 0.03
64_K 63_Y 0.73 0.03
10_A 52_T 0.72 0.03
50_K 10_V 0.70 0.03
92_L 58_R 0.70 0.03
14_S 43_Y 0.69 0.03
84_A 13_R 0.68 0.03
14_S 48_R 0.67 0.02
84_A 56_V 0.66 0.02
90_E 9_L 0.66 0.02
91_A 46_Q 0.65 0.02
74_P 65_D 0.65 0.02
29_W 50_V 0.65 0.02
12_V 62_R 0.65 0.02
8_I 60_Q 0.64 0.02
31_H 66_S 0.64 0.02
50_K 57_E 0.64 0.02
88_K 4_G 0.61 0.02
57_L 21_V 0.60 0.02
90_E 30_E 0.59 0.02
58_H 22_I 0.59 0.02
68_R 35_V 0.59 0.02
50_K 37_S 0.59 0.02
91_A 26_S 0.58 0.02
24_G 31_I 0.57 0.02
73_R 48_R 0.57 0.02
92_L 22_I 0.57 0.02
2_K 49_F 0.56 0.01
45_T 38_K 0.56 0.01
58_H 27_T 0.56 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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