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OPENSEQ.org

L23 - L25
UniProt: Q5SHP0 - Q5SHZ1
Length: 302
Sequences: 1201
Seq/Len: 4.32
I_Prob: 0.03
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dXZ 3v2fXZContact Map
2j002j01XZ 2j03XZContact Map
4juw4juxXZContact Map
4kix4kixTV 4kizTV 4kj1TV 4kj3TVContact Map
4kj54kj5TV 4kj7TV 4kj9TV 4kjbTVContact Map
2zjr2zjrQSContact Map
4btc4btdXZContact Map
3uyd3uyeTV 3uygTVContact Map
4gd13r8sTV 3r8tTVContact Map
3ohc3ohjXZ 3ohkXZContact Map


Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
24_G 97_E 1.02 0.03
61_G 15_P 0.85 0.02
82_Q 5_L 0.81 0.01
91_A 62_P 0.80 0.01
21_F 58_V 0.79 0.01
34_A 162_E 0.79 0.01
45_T 117_L 0.78 0.01
94_G 5_L 0.78 0.01
14_S 79_R 0.78 0.01
52_V 9_Y 0.78 0.01
75_D 128_V 0.75 0.01
38_E 73_Q 0.74 0.01
88_K 111_V 0.74 0.01
13_L 22_G 0.73 0.01
14_S 80_R 0.72 0.01
45_T 126_V 0.70 0.01
53_K 174_V 0.69 0.01
85_P 37_V 0.68 0.01
26_Y 44_F 0.67 0.01
80_I 31_R 0.67 0.01
84_A 69_T 0.66 0.01
8_I 42_V 0.66 0.01
12_V 63_D 0.66 0.01
23_E 156_K 0.66 0.01
54_V 78_K 0.66 0.01
64_K 172_A 0.66 0.01
44_E 4_R 0.65 0.01
29_W 32_H 0.65 0.01
7_V 21_A 0.64 0.01
54_V 48_F 0.63 0.01
39_I 120_I 0.63 0.01
77_K 59_L 0.63 0.01
16_K 72_R 0.63 0.01
68_R 61_L 0.63 0.01
9_L 59_L 0.62 0.01
29_W 45_D 0.62 0.01
47_F 161_V 0.62 0.01
84_A 86_V 0.62 0.01
39_I 74_V 0.62 0.01
8_I 103_R 0.62 0.01
43_V 134_P 0.62 0.01
61_G 7_A 0.62 0.01
16_K 85_H 0.62 0.01
91_A 57_I 0.61 0.01
42_A 96_V 0.61 0.01
60_R 5_L 0.61 0.01
94_G 71_V 0.61 0.01
24_G 133_I 0.61 0.01
38_E 100_V 0.60 0.01
38_E 89_F 0.60 0.01
22_A 122_R 0.60 0.01
53_K 121_H 0.60 0.01
32_P 174_V 0.59 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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