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OPENSEQ.org
L23 - L36
UniProt: Q5SHP0 - Q5SHR2
Length: 133
Sequences: 890
Seq/Len: 6.90
I_Prob: 0.94
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dX9 3v2fX9Contact Map
2j002j01X9 2j03X9Contact Map
4juw4juxX9Contact Map
4kix4kixT4 4kizT4 4kj1T4 4kj3T4Contact Map
4kj54kj5T4 4kj7T4 4kj9T4 4kjbT4Contact Map
2zjr2zjrQ4Contact Map
4btc4btdX9Contact Map
4gd13r8sT4 3r8tT4Contact Map
3knh3kniX9 3knkX9Contact Map
3v223v23X9 3v25X9Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
25_K 31_K 1.66 0.94
61_G 15_K 1.03 0.54
22_A 35_R 1.01 0.52
51_V 37_G 0.95 0.45
4_A 5_A 0.94 0.44
47_F 13_K 0.91 0.40
9_L 22_R 0.89 0.38
41_N 20_H 0.87 0.35
19_A 15_K 0.82 0.30
5_Y 5_A 0.81 0.29
76_R 31_K 0.80 0.28
82_Q 9_R 0.79 0.26
66_L 31_K 0.76 0.24
68_R 4_R 0.75 0.23
87_Q 12_D 0.74 0.21
27_T 23_V 0.73 0.21
26_Y 12_D 0.73 0.21
40_K 28_E 0.73 0.21
26_Y 22_R 0.70 0.19
12_V 17_I 0.70 0.19
45_T 29_N 0.69 0.18
42_A 3_V 0.69 0.18
20_G 22_R 0.69 0.17
3_T 5_A 0.69 0.17
13_L 7_V 0.65 0.15
14_S 20_H 0.64 0.14
90_E 18_R 0.63 0.13
92_L 5_A 0.62 0.12
65_R 32_H 0.62 0.12
94_G 17_I 0.61 0.12
55_N 35_R 0.60 0.11
20_G 13_K 0.60 0.11
57_L 8_K 0.60 0.11
38_E 21_G 0.59 0.11
92_L 22_R 0.59 0.10
80_I 30_P 0.58 0.10
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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