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OPENSEQ.org
L23 - S08
UniProt: Q5SHP0 - Q5SHQ2
Length: 234
Sequences: 1565
Seq/Len: 7.02
I_Prob: 0.03
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cH 3v2dX 3v2eH 3v2fXContact Map
2j002j00H 2j01X 2j02H 2j03XContact Map
4juw4juwH 4juxXContact Map
4kix4kixT 4kiyH 4kizT 4kj0H 4kj1T 4kj2H 4kj3T 4kj4HContact Map
4kj54kj5T 4kj6H 4kj7T 4kj8H 4kj9T 4kjaH 4kjbT 4kjcHContact Map
3ohc3ohcH 3ohdH 3ohjX 3ohkXContact Map
3knh3knhH 3kniX 3knjH 3knkXContact Map
3uz63uz6K 3uz7K 3uz8T 3uz9TContact Map
3u5b3u5cW 3u5eX 3u5gW 3u5iXContact Map
3oge3ogeH 3ogyH 3oh5X 3oh7XContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
8_I 123_E 0.99 0.03
17_A 78_Q 0.95 0.03
47_F 42_E 0.94 0.02
56_T 105_R 0.93 0.02
12_V 120_T 0.90 0.02
61_G 2_L 0.83 0.02
46_A 133_L 0.81 0.02
38_E 56_K 0.79 0.01
41_N 116_K 0.78 0.01
58_H 128_G 0.76 0.01
78_K 79_V 0.75 0.01
85_P 57_P 0.74 0.01
5_Y 138_W 0.73 0.01
4_A 38_I 0.72 0.01
57_L 49_E 0.71 0.01
39_I 127_L 0.71 0.01
76_R 137_V 0.70 0.01
14_S 88_K 0.70 0.01
11_P 8_D 0.70 0.01
73_R 59_L 0.69 0.01
7_V 8_D 0.67 0.01
44_E 134_I 0.65 0.01
41_N 84_R 0.64 0.01
11_P 27_P 0.63 0.01
77_K 48_Y 0.63 0.01
70_L 98_K 0.63 0.01
65_R 9_M 0.63 0.01
94_G 126_K 0.62 0.01
24_G 135_C 0.61 0.01
54_V 12_R 0.60 0.01
93_E 107_L 0.60 0.01
25_K 135_C 0.60 0.01
68_R 76_P 0.60 0.01
58_H 46_K 0.59 0.01
14_S 20_Y 0.59 0.01
58_H 44_F 0.59 0.01
9_L 111_I 0.58 0.01
14_S 46_K 0.58 0.01
70_L 28_A 0.58 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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