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OPENSEQ.org
L23 - L29
UniProt: Q5SHP0 - Q5SHP6
Length: 168
Sequences: 1127
Seq/Len: 7.22
I_Prob: 1.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
1vqo1vqoSVContact Map
1vq81vq8SVContact Map
1vqp1vqpSVContact Map
1vqm1vqmSVContact Map
1vql1vqlSVContact Map
1vqk1vqkSVContact Map
1yhq1yhqSVContact Map
1s721s72SVContact Map
1vq91vq9SVContact Map
1vqn1vqnSVContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
6_D 29_K 3.21 1.00
5_Y 30_R 1.28 0.85
3_T 54_K 0.98 0.58
64_K 42_G 0.84 0.41
12_V 46_Q 0.78 0.32
6_D 37_F 0.75 0.29
91_A 41_I 0.74 0.28
11_P 37_F 0.74 0.28
78_K 58_A 0.73 0.27
61_G 56_Q 0.73 0.27
17_A 53_L 0.73 0.27
3_T 26_R 0.72 0.25
36_K 40_S 0.68 0.22
78_K 64_L 0.67 0.21
66_L 39_A 0.66 0.20
77_K 54_K 0.65 0.18
25_K 32_L 0.64 0.18
12_V 48_H 0.63 0.17
87_Q 41_I 0.63 0.17
80_I 23_K 0.62 0.16
25_K 29_K 0.62 0.16
10_A 32_L 0.62 0.16
13_L 17_S 0.62 0.16
62_K 57_I 0.62 0.16
66_L 30_R 0.61 0.15
12_V 15_K 0.60 0.15
21_F 40_S 0.60 0.14
84_A 17_S 0.60 0.14
10_A 39_A 0.60 0.14
14_S 68_R 0.59 0.14
37_T 17_S 0.59 0.14
35_T 15_K 0.59 0.14
17_A 43_Q 0.59 0.14
61_G 61_L 0.59 0.13
92_L 41_I 0.58 0.13
62_K 42_G 0.58 0.13
8_I 37_F 0.58 0.13
12_V 29_K 0.57 0.12
8_I 29_K 0.57 0.12
92_L 45_S 0.57 0.12
78_K 55_R 0.57 0.12
8_I 10_L 0.57 0.12
12_V 32_L 0.57 0.12
16_K 60_L 0.57 0.12
47_F 42_G 0.55 0.11
33_K 16_L 0.55 0.11
92_L 33_M 0.54 0.10
88_K 34_E 0.53 0.10
56_T 50_I 0.53 0.10
25_K 39_A 0.53 0.10
58_H 20_E 0.53 0.10
65_R 38_Q 0.53 0.09
26_Y 24_L 0.53 0.09
20_G 19_V 0.52 0.09
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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