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OPENSEQ.org
L23 - S12
UniProt: Q5SHP0 - Q5SHN3
Length: 228
Sequences: 1100
Seq/Len: 5.07
I_Prob: 0.20
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cL 3v2dX 3v2eL 3v2fXContact Map
2j002j00L 2j01X 2j02L 2j03XContact Map
4juw4juwL 4juxXContact Map
4kix4kixT 4kiyL 4kizT 4kj0L 4kj1T 4kj2L 4kj3T 4kj4LContact Map
4kj54kj5T 4kj6L 4kj7T 4kj8L 4kj9T 4kjaL 4kjbT 4kjcLContact Map
3ohc3ohcL 3ohdL 3ohjX 3ohkXContact Map
3knh3knhL 3kniX 3knjL 3knkXContact Map
3uz63uz6O 3uz7O 3uz8T 3uz9TContact Map
3oge3ogeL 3ogyL 3oh5X 3oh7XContact Map
3uyd3uydO 3uyeT 3uyfO 3uygTContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
91_A 58_T 1.17 0.20
24_G 82_I 0.95 0.10
26_Y 81_L 0.92 0.09
33_K 65_A 0.92 0.09
6_D 68_P 0.90 0.08
88_K 2_P 0.90 0.08
73_R 58_T 0.90 0.08
13_L 102_Y 0.89 0.08
9_L 15_V 0.89 0.08
26_Y 113_S 0.88 0.08
54_V 102_Y 0.88 0.08
74_P 27_A 0.88 0.08
12_V 20_K 0.85 0.07
92_L 54_K 0.82 0.06
46_A 65_A 0.82 0.06
35_T 31_R 0.81 0.06
17_A 30_R 0.81 0.06
26_Y 109_D 0.81 0.06
17_A 20_K 0.80 0.06
35_T 34_C 0.80 0.06
44_E 112_K 0.80 0.06
2_K 70_E 0.80 0.06
14_S 53_A 0.79 0.06
80_I 53_A 0.79 0.06
72_K 20_K 0.79 0.05
64_K 17_K 0.78 0.05
74_P 30_R 0.78 0.05
21_F 105_A 0.78 0.05
75_D 11_G 0.78 0.05
72_K 111_K 0.77 0.05
18_Y 96_H 0.77 0.05
22_A 58_T 0.77 0.05
16_K 52_V 0.76 0.05
57_L 16_R 0.76 0.05
27_T 35_T 0.76 0.05
47_F 59_S 0.74 0.04
10_A 49_L 0.74 0.04
75_D 119_T 0.73 0.04
70_L 109_D 0.73 0.04
44_E 102_Y 0.73 0.04
2_K 121_K 0.72 0.04
3_T 65_A 0.72 0.04
29_W 21_V 0.72 0.04
75_D 10_K 0.72 0.04
91_A 98_V 0.71 0.04
59_V 105_A 0.71 0.04
92_L 64_T 0.71 0.04
35_T 101_V 0.71 0.04
74_P 82_I 0.71 0.04
65_R 22_P 0.71 0.04
21_F 70_E 0.71 0.04
47_F 61_Y 0.71 0.04
65_R 61_Y 0.70 0.04
16_K 58_T 0.70 0.04
90_E 58_T 0.69 0.04
13_L 101_V 0.69 0.04
2_K 104_A 0.69 0.04
74_P 15_V 0.69 0.04
85_P 113_S 0.68 0.04
57_L 56_R 0.68 0.04
85_P 125_A 0.68 0.03
51_V 62_E 0.67 0.03
12_V 68_P 0.67 0.03
94_G 21_V 0.67 0.03
94_G 98_V 0.67 0.03
25_K 101_V 0.67 0.03
65_R 119_T 0.66 0.03
70_L 81_L 0.66 0.03
72_K 40_V 0.66 0.03
32_P 27_A 0.66 0.03
87_Q 23_A 0.66 0.03
24_G 38_R 0.65 0.03
43_V 5_N 0.65 0.03
62_K 9_R 0.65 0.03
22_A 19_S 0.65 0.03
48_K 109_D 0.65 0.03
33_K 43_K 0.65 0.03
18_Y 109_D 0.65 0.03
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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