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OPENSEQ.org
L23 - S13
UniProt: Q5SHP0 - P80377
Length: 222
Sequences: 1406
Seq/Len: 6.54
I_Prob: 0.03
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cM 3v2dX 3v2eM 3v2fXContact Map
2j002j00M 2j01X 2j02M 2j03XContact Map
4juw4juwM 4juxXContact Map
4kix4kixT 4kiyM 4kizT 4kj0M 4kj1T 4kj2M 4kj3T 4kj4MContact Map
4kj54kj5T 4kj6M 4kj7T 4kj8M 4kj9T 4kjaM 4kjbT 4kjcMContact Map
3knh3knhM 3kniX 3knjM 3knkXContact Map
3ohc3ohcM 3ohdM 3ohjX 3ohkXContact Map
3uz63uz6P 3uz7P 3uz8T 3uz9TContact Map
3u5b3u5cS 3u5eX 3u5gS 3u5iXContact Map
3oge3ogeM 3ogyM 3oh5X 3oh7XContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
92_L 8_E 1.01 0.03
9_L 47_D 0.98 0.03
26_Y 84_I 0.95 0.03
71_G 85_G 0.85 0.02
6_D 44_R 0.83 0.02
54_V 49_T 0.82 0.02
19_A 56_L 0.79 0.02
78_K 88_R 0.78 0.02
72_K 27_K 0.77 0.02
78_K 81_L 0.76 0.01
83_V 30_A 0.73 0.01
50_K 35_E 0.73 0.01
9_L 15_V 0.71 0.01
94_G 52_E 0.71 0.01
66_L 50_E 0.69 0.01
76_R 122_K 0.69 0.01
20_G 113_P 0.67 0.01
47_F 48_L 0.66 0.01
75_D 62_N 0.66 0.01
25_K 86_C 0.65 0.01
87_Q 8_E 0.64 0.01
85_P 42_A 0.64 0.01
87_Q 43_T 0.64 0.01
65_R 48_L 0.63 0.01
92_L 12_N 0.63 0.01
26_Y 41_P 0.63 0.01
85_P 12_N 0.63 0.01
21_F 56_L 0.62 0.01
40_K 59_Y 0.62 0.01
17_A 111_K 0.62 0.01
26_Y 98_V 0.62 0.01
50_K 107_A 0.62 0.01
31_H 65_K 0.61 0.01
68_R 90_L 0.61 0.01
6_D 53_V 0.61 0.01
76_R 63_T 0.61 0.01
33_K 34_L 0.61 0.01
38_E 95_G 0.61 0.01
56_T 61_E 0.60 0.01
54_V 95_G 0.60 0.01
92_L 9_I 0.59 0.01
66_L 18_A 0.59 0.01
3_T 82_M 0.58 0.01
71_G 116_T 0.58 0.01
10_A 30_A 0.58 0.01
60_R 82_M 0.57 0.01
52_V 113_P 0.57 0.01
87_Q 107_A 0.57 0.01
61_G 66_L 0.57 0.01
80_I 22_I 0.57 0.01
70_L 116_T 0.56 0.01
90_E 120_K 0.56 0.01
20_G 82_M 0.56 0.01
90_E 40_N 0.56 0.01
4_A 7_V 0.56 0.01
92_L 95_G 0.56 0.01
35_T 104_R 0.56 0.01
2_K 85_G 0.56 0.01
74_P 115_K 0.56 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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