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OPENSEQ.org
L23 - L33
UniProt: Q5SHP0 - P35871
Length: 150
Sequences: 1169
Seq/Len: 8.12
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dX6 3v2fX6Contact Map
2j002j01X6 2j03X6Contact Map
4juw4juxX6Contact Map
4kix4kixT1 4kizT1 4kj1T1 4kj3T1Contact Map
4kj54kj5T1 4kj7T1 4kj9T1 4kjbT1Contact Map
2zjr2zjrQ1Contact Map
4btc4btdX6Contact Map
3uyd3uyeT6 3uygT6Contact Map
4gd13r8sT1 3r8tT1Contact Map
3ohc3ohjX6 3ohkX6Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
11_P 50_R 0.85 0.00
92_L 33_K 0.73 0.00
26_Y 39_Y 0.73 0.00
54_V 31_P 0.72 0.00
22_A 44_R 0.70 0.00
80_I 27_K 0.70 0.00
11_P 25_K 0.68 0.00
65_R 16_C 0.66 0.00
92_L 29_N 0.66 0.00
27_T 43_C 0.65 0.00
52_V 41_P 0.65 0.00
5_Y 33_K 0.65 0.00
60_R 39_Y 0.62 0.00
34_A 48_V 0.62 0.00
14_S 4_E 0.62 0.00
92_L 37_R 0.62 0.00
32_P 46_H 0.61 0.00
19_A 34_L 0.60 0.00
38_E 42_W 0.59 0.00
9_L 43_C 0.59 0.00
20_G 11_L 0.58 0.00
54_V 6_R 0.58 0.00
27_T 54_I 0.58 0.00
3_T 45_K 0.58 0.00
44_E 7_I 0.58 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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