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OPENSEQ.org
L04 - L17
UniProt: Q5SHN9 - Q9Z9H5
Length: 328
Sequences: 1401
Seq/Len: 4.41
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dFR 3v2fFRContact Map
2j002j01FR 2j03FRContact Map
4juw4juxFRContact Map
4kix4kixEN 4kizEN 4kj1EN 4kj3ENContact Map
4kj54kj5EN 4kj7EN 4kj9EN 4kjbENContact Map
2zjr2zjrCKContact Map
4btc4btdFRContact Map
3uyd3uyeF0 3uygF0Contact Map
4gd13r8sEN 3r8tENContact Map
3ohc3ohjFR 3ohkFRContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
36_V 20_L 0.86 0.00
194_M 98_L 0.79 0.00
157_V 28_L 0.74 0.00
193_V 48_V 0.74 0.00
46_R 80_F 0.72 0.00
19_E 97_V 0.71 0.00
132_V 47_F 0.70 0.00
97_Y 85_P 0.66 0.00
107_K 22_R 0.66 0.00
48_T 111_L 0.65 0.00
17_R 24_Q 0.65 0.00
11_V 55_A 0.65 0.00
170_L 83_I 0.64 0.00
131_G 103_R 0.64 0.00
115_A 109_A 0.64 0.00
66_P 4_L 0.63 0.00
192_L 40_K 0.61 0.00
199_W 81_D 0.61 0.00
66_P 97_V 0.61 0.00
82_I 51_L 0.57 0.00
97_Y 70_L 0.57 0.00
135_K 29_L 0.57 0.00
145_E 114_V 0.57 0.00
84_V 16_H 0.56 0.00
85_G 46_G 0.56 0.00
144_K 18_L 0.56 0.00
100_T 28_L 0.56 0.00
103_K 40_K 0.55 0.00
123_L 43_E 0.55 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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