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OPENSEQ.org
L04 - L07
UniProt: Q5SHN9 - Q8VVE2
Length: 335
Sequences: 1484
Seq/Len: 4.57
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j01FL 2j03FLContact Map
4kix4kixE6 4kizE 4kj1E 4kj3EContact Map
3i8f3i8fF 3i8iFIJContact Map
3sfs3sgfELKMJContact Map
2zjq2zjqC5Contact Map
4kd84kd9Fe 4kdbFeContact Map
4kcy4kczFe 4kd2FeContact Map
3uoq3uosEKLMJContact Map
4kbt4kbuFe 4kbwFeContact Map
4kdg4kdhFe 4kdkFeContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
12_L 94_E 0.71 0.00
135_K 29_E 0.71 0.00
102_P 113_K 0.67 0.00
87_G 97_G 0.63 0.00
170_L 52_A 0.62 0.00
170_L 73_E 0.59 0.00
184_Y 27_L 0.59 0.00
149_D 77_E 0.59 0.00
193_V 15_A 0.58 0.00
44_R 124_L 0.57 0.00
191_R 8_I 0.56 0.00
110_L 22_Q 0.56 0.00
201_V 109_E 0.56 0.00
85_G 117_A 0.56 0.00
91_G 27_L 0.55 0.00
149_D 55_E 0.55 0.00
69_H 113_K 0.54 0.00
121_G 52_A 0.54 0.00
128_A 109_E 0.54 0.00
195_D 24_I 0.53 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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