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OPENSEQ.org
L04 - L09
UniProt: Q5SHN9 - Q5SLQ1
Length: 358
Sequences: 1427
Seq/Len: 4.11
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dFI 3v2fFIContact Map
2j002j01FI 2j03FIContact Map
4kix4kixEH 4kizEH 4kj1EH 4kj3EHContact Map
4kj54kj5EH 4kj7EH 4kj9EH 4kjbEHContact Map
3uyd3uyeFK 3uygFKContact Map
4gd13r8sEH 3r8tEHContact Map
3knh3kniFI 3knkFIContact Map
3ohc3ohjFI 3ohkFIContact Map
3ohy3ohzFI 3oi1FIContact Map
3f1e3f1fFI 3f1hFIContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
168_R 135_E 0.81 0.00
66_P 25_Y 0.81 0.00
190_E 29_Y 0.79 0.00
197_D 57_R 0.73 0.00
102_P 115_A 0.72 0.00
138_E 72_L 0.71 0.00
110_L 138_I 0.71 0.00
156_L 119_P 0.70 0.00
89_V 92_V 0.70 0.00
192_L 62_K 0.69 0.00
157_V 125_E 0.69 0.00
17_R 109_I 0.69 0.00
102_P 92_V 0.67 0.00
204_N 72_L 0.67 0.00
66_P 102_S 0.67 0.00
197_D 102_S 0.64 0.00
101_L 127_V 0.64 0.00
142_W 77_L 0.64 0.00
121_G 91_S 0.64 0.00
186_I 104_Q 0.63 0.00
48_T 34_G 0.63 0.00
170_L 99_E 0.63 0.00
66_P 39_A 0.62 0.00
107_K 34_G 0.61 0.00
66_P 29_Y 0.61 0.00
132_V 18_V 0.61 0.00
84_V 22_K 0.60 0.00
50_S 125_E 0.60 0.00
103_K 7_E 0.59 0.00
135_K 69_K 0.59 0.00
131_G 96_D 0.59 0.00
192_L 12_L 0.59 0.00
49_A 96_D 0.58 0.00
118_A 123_L 0.58 0.00
37_V 78_T 0.58 0.00
84_V 57_R 0.58 0.00
108_K 58_L 0.58 0.00
36_V 22_K 0.58 0.00
52_K 99_E 0.58 0.00
123_L 48_E 0.58 0.00
93_K 94_A 0.58 0.00
196_L 26_A 0.57 0.00
79_G 2_K 0.57 0.00
109_G 81_V 0.57 0.00
163_V 126_Y 0.57 0.00
167_A 63_A 0.57 0.00
72_R 111_P 0.57 0.00
13_S 63_A 0.57 0.00
194_M 143_S 0.56 0.00
115_A 4_I 0.56 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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