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OPENSEQ.org
L04 - S06
UniProt: Q5SHN9 - Q5SLP8
Length: 311
Sequences: 1206
Seq/Len: 4.03
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cF 3v2dF 3v2eF 3v2fFContact Map
2j002j00F 2j01F 2j02F 2j03FContact Map
4juw4juwF 4juxFContact Map
4kix4kixE 4kiyF 4kizE 4kj0F 4kj1E 4kj2F 4kj3E 4kj4FContact Map
4kj54kj5E 4kj6F 4kj7E 4kj8F 4kj9E 4kjaF 4kjbE 4kjcFContact Map
3ohc3ohcF 3ohdF 3ohjF 3ohkFContact Map
3knh3knhF 3kniF 3knjF 3knkFContact Map
3uz63uz6I 3uz7I 3uz8F 3uz9FContact Map
3oge3ogeF 3ogyF 3oh5F 3oh7FContact Map
3uyd3uydI 3uyeF 3uyfI 3uygFContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
89_V 51_P 0.90 0.00
96_D 10_L 0.88 0.00
22_A 91_V 0.83 0.00
156_L 24_E 0.80 0.00
15_S 80_R 0.79 0.00
199_W 72_V 0.79 0.00
61_G 9_V 0.78 0.00
103_K 6_V 0.77 0.00
91_G 58_G 0.76 0.00
156_L 63_Y 0.72 0.00
66_P 32_N 0.72 0.00
121_G 95_E 0.71 0.00
193_V 18_Q 0.70 0.00
115_A 31_E 0.70 0.00
193_V 68_P 0.69 0.00
16_G 52_I 0.68 0.00
83_F 45_L 0.68 0.00
200_E 24_E 0.68 0.00
113_A 47_R 0.68 0.00
157_V 90_V 0.68 0.00
87_G 96_P 0.67 0.00
49_A 67_M 0.67 0.00
128_A 28_R 0.66 0.00
34_W 81_I 0.65 0.00
185_D 81_I 0.65 0.00
112_M 46_R 0.64 0.00
34_W 45_L 0.64 0.00
17_R 36_R 0.64 0.00
119_R 46_R 0.64 0.00
121_G 36_R 0.64 0.00
91_G 77_R 0.63 0.00
115_A 43_L 0.63 0.00
33_L 83_D 0.63 0.00
56_E 87_R 0.63 0.00
121_G 19_L 0.62 0.00
20_L 77_R 0.62 0.00
56_E 32_N 0.61 0.00
92_P 58_G 0.61 0.00
28_I 78_E 0.61 0.00
91_G 9_V 0.61 0.00
154_V 1_M 0.61 0.00
22_A 76_A 0.61 0.00
34_W 83_D 0.61 0.00
187_V 89_M 0.60 0.00
88_V 6_V 0.60 0.00
21_A 41_E 0.60 0.00
58_A 28_R 0.60 0.00
72_R 54_K 0.59 0.00
87_G 52_I 0.59 0.00
188_R 63_Y 0.59 0.00
175_T 26_I 0.59 0.00
125_L 70_D 0.59 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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