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OPENSEQ.org
L04 - L11
UniProt: Q5SHN9 - Q5SLP6
Length: 357
Sequences: 1516
Seq/Len: 4.46
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
1vqo1vqoCIContact Map
1vq81vq8CIContact Map
1vqp1vqpCIContact Map
1vqm1vqmCIContact Map
1vql1vqlCIContact Map
1vqk1vqkCIContact Map
1yhq1yhqCIContact Map
1s721s72CIContact Map
1vq91vq9CIContact Map
1vqn1vqnCIContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
102_P 8_V 0.85 0.00
157_V 138_V 0.74 0.00
16_G 20_A 0.69 0.00
69_H 12_L 0.69 0.00
90_F 45_T 0.69 0.00
29_N 97_G 0.69 0.00
24_L 133_S 0.68 0.00
49_A 126_M 0.68 0.00
13_S 127_I 0.67 0.00
115_A 71_T 0.67 0.00
15_S 68_V 0.66 0.00
110_L 63_R 0.65 0.00
166_A 48_M 0.64 0.00
50_S 63_R 0.64 0.00
128_A 84_L 0.63 0.00
145_E 4_V 0.62 0.00
171_P 13_P 0.62 0.00
128_A 68_V 0.62 0.00
84_V 12_L 0.62 0.00
186_I 12_L 0.59 0.00
206_I 99_I 0.59 0.00
126_V 5_V 0.58 0.00
44_R 122_A 0.58 0.00
188_R 66_T 0.58 0.00
62_R 4_V 0.57 0.00
19_E 102_E 0.57 0.00
168_R 66_T 0.56 0.00
141_A 101_W 0.56 0.00
193_V 106_E 0.56 0.00
36_V 131_A 0.56 0.00
53_T 104_V 0.56 0.00
193_V 85_E 0.56 0.00
52_K 106_E 0.55 0.00
181_L 7_V 0.55 0.00
18_R 99_I 0.55 0.00
125_L 109_K 0.55 0.00
181_L 120_L 0.55 0.00
206_I 8_V 0.54 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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