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OPENSEQ.org
L04 - L18
UniProt: Q5SHN9 - Q5SHQ4
Length: 322
Sequences: 1327
Seq/Len: 4.28
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
1vqo1vqoCNContact Map
1vq81vq8CNContact Map
1vqp1vqpCNContact Map
1vqm1vqmCNContact Map
1vql1vqlCNContact Map
1vqk1vqkCNContact Map
1yhq1yhqCNContact Map
1s721s72CNContact Map
1vq91vq9CNContact Map
1vqn1vqnCNContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
192_L 63_T 0.87 0.00
168_R 79_A 0.77 0.00
121_G 81_G 0.77 0.00
196_L 50_S 0.76 0.00
83_F 36_Y 0.73 0.00
29_N 35_I 0.71 0.00
155_L 52_S 0.70 0.00
202_F 9_R 0.70 0.00
17_R 79_A 0.70 0.00
33_L 50_S 0.68 0.00
200_E 8_E 0.67 0.00
85_G 32_L 0.66 0.00
114_V 31_S 0.66 0.00
126_V 30_R 0.65 0.00
168_R 17_R 0.63 0.00
34_W 6_A 0.62 0.00
15_S 8_E 0.62 0.00
52_K 49_V 0.62 0.00
91_G 60_G 0.62 0.00
148_L 104_G 0.62 0.00
93_K 8_E 0.61 0.00
201_V 56_L 0.61 0.00
80_A 36_Y 0.60 0.00
88_V 65_V 0.60 0.00
102_P 62_K 0.60 0.00
78_I 64_E 0.60 0.00
15_S 66_A 0.60 0.00
194_M 43_E 0.59 0.00
52_K 98_V 0.59 0.00
156_L 46_V 0.59 0.00
185_D 86_A 0.59 0.00
197_D 71_R 0.58 0.00
206_I 9_R 0.58 0.00
90_F 112_F 0.57 0.00
12_L 12_F 0.57 0.00
58_A 23_R 0.57 0.00
158_T 44_K 0.57 0.00
38_R 108_G 0.57 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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