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OPENSEQ.org
L04 - S14
UniProt: Q5SHN9 - Q5SHQ1
Length: 271
Sequences: 1258
Seq/Len: 4.82
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cN 3v2dF 3v2eN 3v2fFContact Map
2j002j00N 2j01F 2j02N 2j03FContact Map
4juw4juwN 4juxFContact Map
4kix4kixE 4kiyN 4kizE 4kj0N 4kj1E 4kj2N 4kj3E 4kj4NContact Map
4kj54kj5E 4kj6N 4kj7E 4kj8N 4kj9E 4kjaN 4kjbE 4kjcNContact Map
3ohc3ohcN 3ohdN 3ohjF 3ohkFContact Map
3knh3knhN 3kniF 3knjN 3knkFContact Map
3uz63uz6Q 3uz7Q 3uz8F 3uz9FContact Map
3u5b3u5cd 3u5eC 3u5gd 3u5iCContact Map
3oge3ogeN 3ogyN 3oh5F 3oh7FContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
149_D 59_A 0.78 0.00
170_L 11_K 0.74 0.00
80_A 19_R 0.67 0.00
140_L 20_A 0.67 0.00
204_N 57_R 0.62 0.00
202_F 18_V 0.62 0.00
32_L 53_L 0.59 0.00
185_D 36_F 0.58 0.00
56_E 34_Y 0.58 0.00
12_L 33_V 0.57 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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