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OPENSEQ.org
L04 - L14
UniProt: Q5SHN9 - Q5SHP8
Length: 332
Sequences: 1501
Seq/Len: 4.66
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
1vqo1vqoCKContact Map
1vq81vq8CKContact Map
1vqp1vqpCKContact Map
1vqm1vqmCKContact Map
1vql1vqlCKContact Map
1vqk1vqkCKContact Map
1yhq1yhqCKContact Map
1s721s72CKContact Map
1vq91vq9CKContact Map
1vqn1vqnCKContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
78_I 66_K 0.92 0.01
181_L 17_R 0.89 0.01
85_G 42_S 0.83 0.01
66_P 17_R 0.81 0.01
186_I 67_K 0.81 0.01
13_S 42_S 0.81 0.01
191_R 29_N 0.80 0.01
62_R 29_N 0.78 0.01
98_S 35_V 0.77 0.01
88_V 86_I 0.75 0.01
55_G 111_F 0.75 0.00
65_W 69_I 0.73 0.00
84_V 9_E 0.72 0.00
100_T 14_T 0.72 0.00
196_L 72_P 0.70 0.00
45_R 55_G 0.69 0.00
113_A 78_R 0.68 0.00
9_I 42_S 0.68 0.00
12_L 86_I 0.67 0.00
132_V 108_E 0.67 0.00
128_A 22_I 0.67 0.00
98_S 33_A 0.66 0.00
69_H 98_V 0.65 0.00
202_F 33_A 0.64 0.00
162_L 17_R 0.64 0.00
157_V 110_G 0.64 0.00
202_F 20_M 0.64 0.00
38_R 14_T 0.63 0.00
84_V 65_T 0.63 0.00
121_G 89_N 0.62 0.00
155_L 111_F 0.62 0.00
10_P 62_V 0.62 0.00
188_R 78_R 0.61 0.00
62_R 86_I 0.60 0.00
148_L 45_E 0.60 0.00
139_F 80_D 0.59 0.00
114_V 18_K 0.59 0.00
193_V 70_K 0.59 0.00
90_F 88_N 0.59 0.00
100_T 69_I 0.58 0.00
11_V 81_D 0.58 0.00
34_W 21_C 0.58 0.00
143_A 35_V 0.58 0.00
77_D 111_F 0.58 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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