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OPENSEQ.org
L04 - S17
UniProt: Q5SHN9 - Q5SHP7
Length: 315
Sequences: 1593
Seq/Len: 5.67
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cQ 3v2dF 3v2eQ 3v2fFContact Map
2j002j00Q 2j01F 2j02Q 2j03FContact Map
4juw4juwQ 4juxFContact Map
4kix4kixE 4kiyQ 4kizE 4kj0Q 4kj1E 4kj2Q 4kj3E 4kj4QContact Map
4kj54kj5E 4kj6Q 4kj7E 4kj8Q 4kj9E 4kjaQ 4kjbE 4kjcQContact Map
3ohc3ohcQ 3ohdQ 3ohjF 3ohkFContact Map
3knh3knhQ 3kniF 3knjQ 3knkFContact Map
3uz63uz6T 3uz7T 3uz8F 3uz9FContact Map
3oge3ogeQ 3ogyQ 3oh5F 3oh7FContact Map
3uyd3uydT 3uyeF 3uyfT 3uygFContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
102_P 35_V 0.76 0.00
200_E 40_K 0.75 0.00
124_L 67_K 0.68 0.00
190_E 75_R 0.64 0.00
181_L 7_T 0.63 0.00
150_G 67_K 0.62 0.00
206_I 35_V 0.62 0.00
95_R 70_R 0.61 0.00
133_N 59_I 0.60 0.00
126_V 26_Q 0.58 0.00
119_R 36_I 0.58 0.00
154_V 7_T 0.58 0.00
48_T 76_L 0.57 0.00
123_L 67_K 0.57 0.00
109_G 51_Y 0.56 0.00
190_E 52_K 0.56 0.00
50_S 5_V 0.56 0.00
116_D 24_E 0.56 0.00
10_P 18_T 0.55 0.00
204_N 44_A 0.55 0.00
96_D 30_P 0.55 0.00
130_A 53_L 0.55 0.00
12_L 71_F 0.54 0.00
66_P 60_I 0.54 0.00
66_P 70_R 0.54 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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