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OPENSEQ.org
L04 - L23
UniProt: Q5SHN9 - Q5SHP0
Length: 306
Sequences: 1584
Seq/Len: 5.42
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
1vqo1vqoCSContact Map
1vq81vq8CSContact Map
1vqp1vqpCSContact Map
1vqm1vqmCSContact Map
1vql1vqlCSContact Map
1vqk1vqkCSContact Map
1yhq1yhqCSContact Map
1s721s72CSContact Map
1vq91vq9CSContact Map
1vqn1vqnCSContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
108_K 55_N 0.72 0.00
102_P 75_D 0.69 0.00
128_A 57_L 0.69 0.00
91_G 86_G 0.68 0.00
155_L 48_K 0.66 0.00
206_I 8_I 0.66 0.00
42_A 38_E 0.65 0.00
157_V 39_I 0.65 0.00
200_E 34_A 0.64 0.00
32_L 2_K 0.64 0.00
103_K 40_K 0.63 0.00
125_L 81_V 0.62 0.00
174_V 8_I 0.61 0.00
167_A 8_I 0.60 0.00
64_I 65_R 0.59 0.00
17_R 72_K 0.58 0.00
33_L 22_A 0.58 0.00
27_E 47_F 0.58 0.00
143_A 80_I 0.57 0.00
13_S 64_K 0.56 0.00
144_K 33_K 0.56 0.00
109_G 82_Q 0.56 0.00
16_G 26_Y 0.56 0.00
51_T 3_T 0.56 0.00
41_L 56_T 0.55 0.00
182_N 61_G 0.55 0.00
195_D 62_K 0.55 0.00
109_G 92_L 0.55 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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