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OPENSEQ.org
L04 - L32
UniProt: Q5SHN9 - P80339
Length: 270
Sequences: 979
Seq/Len: 3.81
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dF5 3v2fF5Contact Map
2j002j01F5 2j03F5Contact Map
4juw4juxF5Contact Map
4kix4kixE0 4kizE0 4kj1E0 4kj3E0Contact Map
4kj54kj5E0 4kj7E0 4kj9E0 4kjbE0Contact Map
2zjr2zjrCZContact Map
4btc4btdF5Contact Map
3uyd3uyeF5 3uygF5Contact Map
4gd13r8sE0 3r8tE0Contact Map
3knh3kniF5 3knkF5Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
12_L 36_C 0.85 0.00
97_Y 19_R 0.84 0.00
121_G 10_K 0.82 0.00
105_V 13_K 0.81 0.00
11_V 29_T 0.77 0.00
111_A 45_V 0.75 0.00
187_V 33_C 0.74 0.00
89_V 9_K 0.74 0.00
28_I 37_K 0.74 0.00
55_G 15_R 0.73 0.00
141_A 55_R 0.72 0.00
40_Q 51_Y 0.72 0.00
44_R 8_K 0.71 0.00
88_V 13_K 0.71 0.00
90_F 16_R 0.71 0.00
124_L 30_L 0.71 0.00
41_L 8_K 0.70 0.00
145_E 47_P 0.70 0.00
42_A 57_V 0.68 0.00
33_L 40_K 0.67 0.00
109_G 19_R 0.67 0.00
107_K 10_K 0.66 0.00
85_G 12_S 0.65 0.00
166_A 45_V 0.64 0.00
87_G 57_V 0.64 0.00
92_P 7_P 0.64 0.00
174_V 54_G 0.63 0.00
62_R 8_K 0.63 0.00
129_F 58_L 0.62 0.00
37_V 15_R 0.62 0.00
23_D 28_P 0.61 0.00
44_R 17_D 0.60 0.00
69_H 43_H 0.59 0.00
135_K 32_P 0.59 0.00
69_H 20_R 0.59 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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