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OPENSEQ.org
L04 - L19
UniProt: Q5SHN9 - P60490
Length: 356
Sequences: 1262
Seq/Len: 3.99
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dFT 3v2fFTContact Map
2j002j01FT 2j03FTContact Map
4juw4juxFTContact Map
4kix4kixEP 4kizEP 4kj1EP 4kj3EPContact Map
4kj54kj5EP 4kj7EP 4kj9EP 4kjbEPContact Map
2zjr2zjrCMContact Map
4btc4btdFTContact Map
3uyd3uyeFR 3uygFRContact Map
4gd13r8sEP 3r8tEPContact Map
3knh3kniFT 3knkFTContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
99_Y 34_V 0.90 0.00
83_F 7_I 0.83 0.00
190_E 100_Y 0.79 0.00
139_F 65_K 0.77 0.00
117_R 90_Q 0.76 0.00
13_S 112_R 0.75 0.00
18_R 8_K 0.73 0.00
166_A 109_E 0.73 0.00
104_K 80_S 0.72 0.00
77_D 96_R 0.70 0.00
43_K 65_K 0.68 0.00
138_E 7_I 0.67 0.00
66_P 51_R 0.66 0.00
170_L 32_Y 0.66 0.00
170_L 83_I 0.65 0.00
165_R 65_K 0.64 0.00
157_V 52_I 0.63 0.00
12_L 115_R 0.63 0.00
126_V 78_L 0.62 0.00
132_V 51_R 0.61 0.00
143_A 59_T 0.60 0.00
65_W 51_R 0.60 0.00
181_L 52_I 0.60 0.00
192_L 50_I 0.60 0.00
113_A 78_L 0.59 0.00
66_P 33_K 0.59 0.00
46_R 60_T 0.59 0.00
72_R 68_Y 0.59 0.00
201_V 53_R 0.59 0.00
34_W 102_I 0.58 0.00
43_K 17_T 0.58 0.00
110_L 102_I 0.58 0.00
161_E 21_E 0.57 0.00
171_P 88_I 0.57 0.00
106_R 77_P 0.57 0.00
41_L 12_S 0.57 0.00
60_S 60_T 0.57 0.00
89_V 96_R 0.57 0.00
60_S 33_K 0.57 0.00
93_K 65_K 0.56 0.00
82_I 109_E 0.56 0.00
145_E 19_L 0.56 0.00
33_L 34_V 0.56 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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