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OPENSEQ.org
L04 - L33
UniProt: Q5SHN9 - P35871
Length: 264
Sequences: 1208
Seq/Len: 4.76
I_Prob: 0.02
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dF6 3v2fF6Contact Map
2j002j01F6 2j03F6Contact Map
4juw4juxF6Contact Map
4kix4kixE1 4kizE1 4kj1E1 4kj3E1Contact Map
4kj54kj5E1 4kj7E1 4kj9E1 4kjbE1Contact Map
2zjr2zjrC1Contact Map
4btc4btdF6Contact Map
3uyd3uyeF6 3uygF6Contact Map
4gd13r8sE1 3r8tE1Contact Map
3ohc3ohjF6 3ohkF6Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
46_R 33_K 0.98 0.02
128_A 48_V 0.70 0.01
49_A 22_A 0.68 0.01
103_K 22_A 0.66 0.01
184_Y 50_R 0.66 0.01
165_R 29_N 0.64 0.01
18_R 39_Y 0.62 0.01
132_V 39_Y 0.60 0.01
97_Y 24_E 0.59 0.01
66_P 37_R 0.58 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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