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OPENSEQ.org
L03 - L17
UniProt: Q5SHN8 - Q9Z9H5
Length: 324
Sequences: 1328
Seq/Len: 4.14
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dER 3v2fERContact Map
2j002j01ER 2j03ERContact Map
4juw4juxERContact Map
4kix4kixDN 4kizDN 4kj1DN 4kj3DNContact Map
4kj54kj5DN 4kj7DN 4kj9DN 4kjbDNContact Map
2zjr2zjrBKContact Map
4btc4btdERContact Map
3uyd3uyeE0 3uygE0Contact Map
4gd13r8sDN 3r8tDNContact Map
3knh3kniER 3knkERContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
168_M 52_I 0.90 0.00
149_R 14_S 0.84 0.00
128_S 39_P 0.81 0.00
15_F 54_L 0.80 0.00
5_L 55_A 0.79 0.00
196_V 47_F 0.79 0.00
191_P 2_R 0.79 0.00
117_M 87_Y 0.75 0.00
109_K 108_G 0.73 0.00
106_G 111_L 0.72 0.00
111_R 108_G 0.71 0.00
180_N 46_G 0.70 0.00
150_V 115_E 0.70 0.00
57_K 95_T 0.69 0.00
106_G 58_G 0.68 0.00
120_W 70_L 0.67 0.00
111_R 4_L 0.67 0.00
172_V 13_H 0.66 0.00
3_G 86_R 0.66 0.00
46_A 19_A 0.66 0.00
184_V 68_R 0.65 0.00
181_L 101_A 0.65 0.00
132_H 32_G 0.64 0.00
53_P 89_D 0.64 0.00
140_S 44_L 0.64 0.00
195_L 40_K 0.64 0.00
131_A 32_G 0.64 0.00
113_F 82_E 0.63 0.00
124_G 51_L 0.63 0.00
101_R 23_N 0.63 0.00
16_R 15_S 0.62 0.00
107_T 95_T 0.62 0.00
172_V 91_Q 0.62 0.00
91_V 88_R 0.62 0.00
156_M 45_R 0.61 0.00
31_C 67_L 0.61 0.00
33_V 95_T 0.60 0.00
194_G 27_S 0.60 0.00
192_N 52_I 0.60 0.00
163_E 100_L 0.59 0.00
111_R 23_N 0.59 0.00
148_G 8_R 0.59 0.00
199_R 4_L 0.59 0.00
58_R 110_P 0.58 0.00
131_A 33_R 0.58 0.00
2_K 3_H 0.58 0.00
192_N 98_L 0.57 0.00
91_V 68_R 0.57 0.00
100_E 86_R 0.57 0.00
9_V 29_L 0.57 0.00
199_R 46_G 0.57 0.00
184_V 57_R 0.56 0.00
154_K 42_K 0.56 0.00
36_R 47_F 0.56 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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