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OPENSEQ.org
L03 - L07
UniProt: Q5SHN8 - Q8VVE2
Length: 331
Sequences: 1399
Seq/Len: 4.26
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j01EL 2j03ELContact Map
4kix4kixD6 4kizD 4kj1D 4kj3DContact Map
3i8f3i8fE 3i8iEIJContact Map
3sfs3sgfDLKMJContact Map
2zjq2zjqB5Contact Map
4kd84kd9Ee 4kdbEeContact Map
4kcy4kczEe 4kd2EeContact Map
3uoq3uosDKLMJContact Map
4kbt4kbuEe 4kbwEeContact Map
4kdg4kdhEe 4kdkEeContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
15_F 18_L 0.92 0.01
40_E 112_K 0.71 0.00
99_G 94_E 0.69 0.00
26_I 15_A 0.69 0.00
121_N 54_A 0.65 0.00
120_W 16_T 0.65 0.00
100_E 81_I 0.64 0.00
15_F 83_G 0.63 0.00
98_P 124_L 0.61 0.00
147_P 88_E 0.61 0.00
51_F 97_G 0.60 0.00
63_L 104_S 0.60 0.00
121_N 5_I 0.60 0.00
40_E 122_V 0.59 0.00
157_A 122_V 0.59 0.00
60_N 50_A 0.59 0.00
45_T 57_K 0.58 0.00
109_K 14_Q 0.58 0.00
145_K 15_A 0.58 0.00
34_V 123_E 0.58 0.00
102_V 101_E 0.58 0.00
14_I 55_E 0.57 0.00
20_A 22_Q 0.57 0.00
199_R 110_E 0.56 0.00
13_R 13_S 0.56 0.00
50_G 23_L 0.56 0.00
62_P 122_V 0.56 0.00
18_D 94_E 0.55 0.00
104_V 78_L 0.55 0.00
52_L 95_K 0.55 0.00
12_T 38_P 0.55 0.00
153_G 95_K 0.54 0.00
159_H 99_V 0.54 0.00
193_G 9_K 0.54 0.00
2_K 30_A 0.54 0.00
62_P 33_V 0.54 0.00
26_I 102_G 0.53 0.00
192_N 43_A 0.53 0.00
81_I 32_G 0.53 0.00
76_R 30_A 0.53 0.00
70_A 37_A 0.52 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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