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OPENSEQ.org
L03 - L09
UniProt: Q5SHN8 - Q5SLQ1
Length: 354
Sequences: 1384
Seq/Len: 3.95
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dEI 3v2fEIContact Map
2j002j01EI 2j03EIContact Map
4kix4kixDH 4kizDH 4kj1DH 4kj3DHContact Map
4kj54kj5DH 4kj7DH 4kj9DH 4kjbDHContact Map
3uyd3uyeEK 3uygEKContact Map
4gd13r8sDH 3r8tDHContact Map
3knh3kniEI 3knkEIContact Map
3ohc3ohjEI 3ohkEIContact Map
3f1e3f1fEI 3f1hEIContact Map
3ohy3ohzEI 3oi1EIContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
165_V 39_A 0.88 0.00
169_N 82_R 0.86 0.00
7_V 88_I 0.82 0.00
15_F 40_T 0.80 0.00
9_V 26_A 0.80 0.00
66_H 26_A 0.80 0.00
21_V 57_R 0.80 0.00
157_A 22_K 0.80 0.00
173_V 108_T 0.79 0.00
62_P 97_I 0.78 0.00
101_R 26_A 0.78 0.00
193_G 86_T 0.77 0.00
94_E 101_L 0.75 0.00
163_E 84_G 0.75 0.00
201_T 41_E 0.74 0.00
87_E 56_K 0.74 0.00
122_F 12_L 0.74 0.00
176_I 86_T 0.72 0.00
148_G 27_R 0.72 0.00
185_K 101_L 0.71 0.00
123_A 91_S 0.71 0.00
35_Q 82_R 0.70 0.00
172_V 99_E 0.70 0.00
174_D 78_T 0.70 0.00
102_V 69_K 0.69 0.00
25_V 84_G 0.68 0.00
37_R 82_R 0.68 0.00
18_D 8_P 0.68 0.00
146_T 31_L 0.68 0.00
49_L 136_V 0.67 0.00
155_K 96_D 0.67 0.00
39_P 130_Y 0.67 0.00
102_V 41_E 0.66 0.00
105_T 37_V 0.66 0.00
95_I 80_P 0.66 0.00
166_T 130_Y 0.65 0.00
22_P 96_D 0.65 0.00
123_A 33_R 0.65 0.00
60_N 132_P 0.64 0.00
47_V 45_K 0.64 0.00
113_F 97_I 0.64 0.00
99_G 134_P 0.64 0.00
174_D 101_L 0.64 0.00
155_K 111_P 0.64 0.00
198_V 108_T 0.64 0.00
45_T 18_V 0.63 0.00
89_D 123_L 0.63 0.00
194_G 108_T 0.63 0.00
73_E 114_L 0.63 0.00
62_P 76_T 0.63 0.00
150_V 133_H 0.63 0.00
126_P 8_P 0.62 0.00
72_V 11_N 0.62 0.00
120_W 79_I 0.62 0.00
33_V 74_N 0.62 0.00
163_E 147_Q 0.62 0.00
143_N 6_L 0.61 0.00
135_H 16_G 0.61 0.00
185_K 142_V 0.61 0.00
198_V 140_L 0.60 0.00
174_D 89_Y 0.60 0.00
185_K 35_L 0.60 0.00
61_R 107_V 0.60 0.00
145_K 47_L 0.60 0.00
177_P 35_L 0.59 0.00
62_P 120_I 0.59 0.00
2_K 2_K 0.58 0.00
150_V 91_S 0.58 0.00
89_D 59_A 0.58 0.00
111_R 146_A 0.58 0.00
197_I 18_V 0.58 0.00
193_G 64_E 0.58 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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