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OPENSEQ.org
L03 - L31
UniProt: Q5SHN8 - Q5SJE1
Length: 277
Sequences: 1186
Seq/Len: 4.44
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dE4 3v2fE4Contact Map
2j002j01E4 2j03E4Contact Map
4juw4juxE4Contact Map
4btc4btdE4Contact Map
3uyd3uyeE4 3uygE4Contact Map
3ohc3ohjE4 3ohkE4Contact Map
3knh3kniE4 3knkE4Contact Map
3ohy3ohzE4 3oi1E4Contact Map
3v223v23E4 3v25E4Contact Map
3uz63uz8E4 3uz9E4Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
70_A 43_Y 0.81 0.00
47_V 2_K 0.74 0.00
179_E 58_R 0.71 0.00
150_V 43_Y 0.71 0.00
124_G 25_Y 0.69 0.00
33_V 64_G 0.68 0.00
101_R 17_G 0.67 0.00
150_V 34_E 0.67 0.00
179_E 56_V 0.66 0.00
38_T 4_G 0.65 0.00
140_S 5_I 0.65 0.00
192_N 32_Y 0.65 0.00
116_V 53_E 0.65 0.00
104_V 11_P 0.65 0.00
40_E 4_G 0.64 0.00
188_V 62_R 0.64 0.00
151_Y 9_L 0.63 0.00
149_R 34_E 0.62 0.00
98_P 62_R 0.62 0.00
7_V 15_I 0.62 0.00
126_P 34_E 0.62 0.00
201_T 58_R 0.61 0.00
29_G 50_V 0.61 0.00
36_R 43_Y 0.60 0.00
37_R 30_E 0.59 0.00
120_W 58_R 0.59 0.00
4_I 28_K 0.58 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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