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OPENSEQ.org
L03 - L15
UniProt: Q5SHN8 - Q5SHQ7
Length: 356
Sequences: 1448
Seq/Len: 4.18
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
1vqo1vqoBLOContact Map
1vq81vq8BLOContact Map
1vqp1vqpBLOContact Map
1vqm1vqmBLOContact Map
1vql1vqlBLOContact Map
1vqk1vqkBLOContact Map
1yhq1yhqBLOContact Map
1s721s72BLOContact Map
1vq91vq9BLOContact Map
1vqn1vqnBLOContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
181_L 24_G 0.93 0.01
126_P 48_P 0.84 0.01
16_R 116_G 0.80 0.01
138_P 8_P 0.76 0.00
181_L 107_K 0.74 0.00
171_E 106_L 0.74 0.00
71_G 112_L 0.74 0.00
153_G 33_R 0.72 0.00
149_R 31_A 0.72 0.00
188_V 117_E 0.70 0.00
47_V 14_K 0.69 0.00
49_L 144_E 0.69 0.00
147_P 40_S 0.69 0.00
148_G 33_R 0.68 0.00
79_R 86_K 0.68 0.00
113_F 135_L 0.68 0.00
31_C 110_Y 0.67 0.00
60_N 129_A 0.67 0.00
36_R 68_Q 0.66 0.00
101_R 117_E 0.65 0.00
159_H 132_K 0.65 0.00
143_N 40_S 0.64 0.00
155_K 79_R 0.64 0.00
199_R 87_D 0.63 0.00
3_G 12_A 0.61 0.00
140_S 24_G 0.61 0.00
128_S 92_E 0.61 0.00
193_G 129_A 0.61 0.00
83_D 49_R 0.60 0.00
159_H 139_K 0.58 0.00
169_N 12_A 0.58 0.00
108_S 81_Q 0.58 0.00
120_W 121_K 0.58 0.00
194_G 124_K 0.58 0.00
180_N 6_L 0.57 0.00
76_R 147_L 0.57 0.00
41_K 81_Q 0.57 0.00
172_V 102_R 0.57 0.00
146_T 65_R 0.57 0.00
141_I 23_P 0.57 0.00
60_N 106_L 0.57 0.00
188_V 91_F 0.57 0.00
76_R 113_K 0.57 0.00
63_L 132_K 0.56 0.00
69_K 64_K 0.56 0.00
123_A 80_Y 0.56 0.00
196_V 86_K 0.56 0.00
81_I 129_A 0.56 0.00
46_A 125_V 0.56 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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