OPENSEQ.org
L03 - L06
UniProt: Q5SHN8 - Q5SHQ3
Length: 386
Sequences: 1745
Seq/Len: 4.59
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
1vqo1vqoBEContact Map
1vq81vq8BEContact Map
1vqp1vqpBEContact Map
1vqm1vqmBEContact Map
1vql1vqlBEContact Map
1vqk1vqkBEContact Map
1yhq1yhqBEContact Map
1s721s72BEContact Map
1vq91vq9BEContact Map
1vqn1vqnBEContact Map


Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
120_W 123_F 0.86 0.00
116_V 162_I 0.77 0.00
141_I 90_K 0.76 0.00
33_V 88_L 0.70 0.00
167_V 57_D 0.69 0.00
127_D 139_Q 0.69 0.00
171_E 119_E 0.68 0.00
164_R 88_L 0.67 0.00
39_P 83_Y 0.67 0.00
185_K 134_S 0.66 0.00
18_D 155_S 0.66 0.00
159_H 117_P 0.66 0.00
187_A 67_L 0.66 0.00
102_V 10_P 0.66 0.00
145_K 177_G 0.64 0.00
26_I 34_E 0.64 0.00
120_W 74_N 0.63 0.00
37_R 29_P 0.63 0.00
71_G 48_G 0.62 0.00
141_I 111_H 0.61 0.00
197_I 153_K 0.61 0.00
145_K 176_A 0.60 0.00
75_V 173_P 0.60 0.00
58_R 162_I 0.60 0.00
26_I 113_V 0.60 0.00
126_P 141_V 0.59 0.00
116_V 109_F 0.59 0.00
36_R 118_P 0.59 0.00
16_R 67_L 0.58 0.00
20_A 124_E 0.58 0.00
78_L 32_E 0.58 0.00
189_P 103_L 0.58 0.00
41_K 169_V 0.58 0.00
164_R 12_P 0.58 0.00
159_H 173_P 0.57 0.00
76_R 54_R 0.57 0.00
86_P 169_V 0.57 0.00
102_V 23_R 0.56 0.00
147_P 71_L 0.56 0.00
37_R 109_F 0.56 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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