OPENSEQ.org
L03 - S14
UniProt: Q5SHN8 - Q5SHQ1
Length: 267
Sequences: 1157
Seq/Len: 4.38
I_Prob: 0.07
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cN 3v2dE 3v2eN 3v2fEContact Map
2j002j00N 2j01E 2j02N 2j03EContact Map
4juw4juwN 4juxEContact Map
4kix4kixD 4kiyN 4kizD 4kj0N 4kj1D 4kj2N 4kj3D 4kj4NContact Map
4kj54kj5D 4kj6N 4kj7D 4kj8N 4kj9D 4kjaN 4kjbD 4kjcNContact Map
3ohc3ohcN 3ohdN 3ohjE 3ohkEContact Map
3knh3knhN 3kniE 3knjN 3knkEContact Map
3uz63uz6Q 3uz7Q 3uz8E 3uz9EContact Map
3u5b3u5cd 3u5eB 3u5gd 3u5iBContact Map
3oge3ogeN 3ogyN 3oh5E 3oh7EContact Map


Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
100_E 34_Y 1.10 0.07
185_K 27_C 0.83 0.03
15_F 52_Q 0.83 0.03
138_P 37_F 0.75 0.02
4_I 57_R 0.75 0.02
86_P 53_L 0.71 0.02
128_S 3_R 0.71 0.02
172_V 21_Y 0.70 0.02
62_P 50_K 0.69 0.02
114_A 6_L 0.69 0.02
124_G 49_H 0.69 0.02
179_E 7_I 0.68 0.02
114_A 57_R 0.68 0.02
94_E 26_R 0.67 0.02
31_C 22_T 0.67 0.02
146_T 3_R 0.66 0.02
169_N 40_C 0.66 0.02
192_N 32_S 0.65 0.02
140_S 8_E 0.64 0.01
134_I 59_A 0.64 0.01
81_I 53_L 0.63 0.01
170_L 42_I 0.63 0.01
199_R 34_Y 0.62 0.01
13_R 49_H 0.62 0.01
53_P 32_S 0.61 0.01
172_V 4_K 0.61 0.01
15_F 53_L 0.61 0.01
32_P 32_S 0.60 0.01
79_R 56_V 0.59 0.01
62_P 43_C 0.59 0.01
155_K 46_E 0.58 0.01
103_D 30_A 0.58 0.01
83_D 33_V 0.57 0.01
63_L 50_K 0.57 0.01
15_F 30_A 0.57 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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