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OPENSEQ.org
L03 - L14
UniProt: Q5SHN8 - Q5SHP8
Length: 328
Sequences: 1379
Seq/Len: 4.24
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
1vqo1vqoBKContact Map
1vq81vq8BKContact Map
1vqp1vqpBKContact Map
1vqm1vqmBKContact Map
1vql1vqlBKContact Map
1vqk1vqkBKContact Map
1yhq1yhqBKContact Map
1s721s72BKContact Map
1vq91vq9BKContact Map
1vqn1vqnBKContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
120_W 3_Q 0.90 0.00
38_T 87_I 0.89 0.00
165_V 45_E 0.85 0.00
124_G 92_E 0.81 0.00
185_K 66_K 0.80 0.00
150_V 56_D 0.78 0.00
193_G 80_D 0.78 0.00
199_R 89_N 0.77 0.00
91_V 17_R 0.76 0.00
111_R 33_A 0.75 0.00
3_G 25_L 0.75 0.00
120_W 45_E 0.74 0.00
144_R 78_R 0.74 0.00
45_T 62_V 0.73 0.00
42_D 31_K 0.72 0.00
19_R 72_P 0.71 0.00
41_K 31_K 0.71 0.00
91_V 81_D 0.69 0.00
12_T 56_D 0.69 0.00
19_R 86_I 0.69 0.00
172_V 63_V 0.68 0.00
166_T 38_V 0.67 0.00
199_R 9_E 0.67 0.00
22_P 80_D 0.66 0.00
60_N 34_T 0.66 0.00
123_A 91_L 0.65 0.00
31_C 21_C 0.65 0.00
136_R 14_T 0.64 0.00
86_P 94_R 0.64 0.00
126_P 62_V 0.64 0.00
201_T 77_I 0.63 0.00
97_K 14_T 0.63 0.00
117_M 68_E 0.62 0.00
26_I 9_E 0.62 0.00
164_R 77_I 0.62 0.00
201_T 56_D 0.62 0.00
187_A 9_E 0.62 0.00
83_D 84_A 0.61 0.00
133_K 110_G 0.61 0.00
106_G 31_K 0.61 0.00
182_L 66_K 0.61 0.00
180_N 103_A 0.61 0.00
96_F 19_I 0.60 0.00
78_L 59_K 0.60 0.00
153_G 87_I 0.59 0.00
149_R 38_V 0.59 0.00
82_R 114_I 0.59 0.00
116_V 29_N 0.59 0.00
25_V 57_V 0.59 0.00
4_I 96_T 0.58 0.00
51_F 14_T 0.58 0.00
149_R 33_A 0.58 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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