OPENSEQ.org
L03 - S17
UniProt: Q5SHN8 - Q5SHP7
Length: 311
Sequences: 1486
Seq/Len: 5.23
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cQ 3v2dE 3v2eQ 3v2fEContact Map
2j002j00Q 2j01E 2j02Q 2j03EContact Map
4juw4juwQ 4juxEContact Map
4kix4kixD 4kiyQ 4kizD 4kj0Q 4kj1D 4kj2Q 4kj3D 4kj4QContact Map
4kj54kj5D 4kj6Q 4kj7D 4kj8Q 4kj9D 4kjaQ 4kjbD 4kjcQContact Map
3ohc3ohcQ 3ohdQ 3ohjE 3ohkEContact Map
3knh3knhQ 3kniE 3knjQ 3knkEContact Map
3uz63uz6T 3uz7T 3uz8E 3uz9EContact Map
3oge3ogeQ 3ogyQ 3oh5E 3oh7EContact Map
3uyd3uydT 3uyeE 3uyfT 3uygEContact Map


Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
26_I 35_V 0.85 0.00
5_L 35_V 0.75 0.00
184_V 27_F 0.73 0.00
37_R 37_K 0.72 0.00
40_E 81_R 0.72 0.00
196_V 32_Y 0.72 0.00
79_R 67_K 0.71 0.00
31_C 35_V 0.70 0.00
172_V 50_K 0.68 0.00
199_R 37_K 0.66 0.00
127_D 65_I 0.66 0.00
143_N 65_I 0.65 0.00
133_K 44_A 0.64 0.00
83_D 38_R 0.62 0.00
114_A 35_V 0.62 0.00
153_G 68_R 0.60 0.00
140_S 23_V 0.59 0.00
150_V 28_P 0.59 0.00
197_I 31_L 0.59 0.00
199_R 22_L 0.59 0.00
146_T 26_Q 0.58 0.00
51_F 62_S 0.58 0.00
120_W 58_E 0.58 0.00
156_M 26_Q 0.57 0.00
71_G 20_T 0.57 0.00
72_V 79_S 0.57 0.00
193_G 27_F 0.57 0.00
16_R 7_T 0.57 0.00
138_P 44_A 0.56 0.00
79_R 81_R 0.56 0.00
166_T 40_K 0.56 0.00
15_F 14_K 0.55 0.00
169_N 76_L 0.55 0.00
55_N 40_K 0.55 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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