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OPENSEQ.org
L03 - L22
UniProt: Q5SHN8 - Q5SHP3
Length: 319
Sequences: 1505
Seq/Len: 4.79
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
1vqo1vqoBRContact Map
1vq81vq8BRContact Map
1vqp1vqpBRContact Map
1vqm1vqmBRContact Map
1vql1vqlBRContact Map
1vqk1vqkBRContact Map
1yhq1yhqBRContact Map
1s721s72BRContact Map
1vq91vq9BRContact Map
1vqn1vqnBRContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
144_R 86_L 0.94 0.01
109_K 99_R 0.89 0.01
193_G 72_K 0.87 0.01
3_G 65_L 0.80 0.01
25_V 59_V 0.75 0.01
145_K 88_R 0.74 0.01
152_K 99_R 0.74 0.01
153_G 44_A 0.74 0.01
193_G 90_R 0.74 0.01
82_R 56_A 0.74 0.01
132_H 90_R 0.72 0.01
120_W 94_D 0.72 0.01
14_I 12_I 0.71 0.01
199_R 12_I 0.69 0.01
40_E 77_D 0.69 0.01
147_P 38_Y 0.68 0.00
188_V 78_E 0.68 0.00
182_L 22_D 0.67 0.00
148_G 90_R 0.66 0.00
132_H 94_D 0.65 0.00
198_V 52_E 0.64 0.00
83_D 19_L 0.64 0.00
182_L 33_R 0.63 0.00
155_K 67_D 0.61 0.00
61_R 82_L 0.61 0.00
165_V 48_A 0.61 0.00
14_I 40_N 0.60 0.00
159_H 18_R 0.59 0.00
145_K 89_A 0.59 0.00
109_K 85_V 0.58 0.00
31_C 78_E 0.58 0.00
50_G 51_L 0.58 0.00
178_E 68_R 0.58 0.00
99_G 12_I 0.58 0.00
147_P 92_R 0.57 0.00
163_E 94_D 0.57 0.00
138_P 18_R 0.57 0.00
23_V 58_A 0.57 0.00
138_P 100_T 0.57 0.00
26_I 97_K 0.56 0.00
194_G 71_V 0.56 0.00
196_V 79_G 0.56 0.00
126_P 89_A 0.56 0.00
172_V 25_R 0.56 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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