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OPENSEQ.org
L03 - L20
UniProt: Q5SHN8 - P60491
Length: 324
Sequences: 1233
Seq/Len: 3.85
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dEU 3v2fEUContact Map
2j002j01EU 2j03EUContact Map
4juw4juxEUContact Map
4kix4kixDQ 4kizDQ 4kj1DQ 4kj3DQContact Map
4kj54kj5DQ 4kj7DQ 4kj9DQ 4kjbDQContact Map
2zjr2zjrBNContact Map
4btc4btdEUContact Map
3uyd3uyeE1 3uygE1Contact Map
4gd13r8sDQ 3r8tDQContact Map
3ohc3ohjEU 3ohkEUContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
150_V 109_L 0.89 0.00
145_K 91_D 0.86 0.00
198_V 74_L 0.82 0.00
132_H 14_H 0.78 0.00
111_R 2_P 0.77 0.00
4_I 51_K 0.77 0.00
140_S 16_K 0.75 0.00
120_W 90_V 0.74 0.00
198_V 42_A 0.72 0.00
124_G 40_F 0.72 0.00
144_R 53_R 0.70 0.00
51_F 2_P 0.69 0.00
145_K 7_G 0.68 0.00
63_L 51_K 0.68 0.00
168_M 13_K 0.68 0.00
62_P 59_R 0.67 0.00
153_G 69_C 0.67 0.00
133_K 91_D 0.67 0.00
135_H 26_G 0.67 0.00
109_K 104_Q 0.67 0.00
84_F 33_R 0.66 0.00
159_H 114_K 0.66 0.00
114_A 12_R 0.65 0.00
154_K 22_K 0.64 0.00
62_P 36_R 0.64 0.00
157_A 25_W 0.64 0.00
128_S 18_L 0.64 0.00
187_A 42_A 0.63 0.00
111_R 1_M 0.63 0.00
32_P 91_D 0.63 0.00
144_R 36_R 0.63 0.00
149_R 90_V 0.62 0.00
18_D 51_K 0.62 0.00
87_E 46_A 0.61 0.00
198_V 11_R 0.61 0.00
41_K 53_R 0.61 0.00
191_P 80_I 0.60 0.00
147_P 47_Y 0.60 0.00
146_T 41_A 0.60 0.00
144_R 24_Y 0.60 0.00
172_V 108_E 0.59 0.00
176_I 42_A 0.59 0.00
99_G 68_A 0.59 0.00
184_V 107_A 0.59 0.00
137_H 6_T 0.59 0.00
185_K 42_A 0.59 0.00
146_T 51_K 0.59 0.00
78_L 96_A 0.59 0.00
98_P 71_Q 0.59 0.00
132_H 31_S 0.58 0.00
126_P 40_F 0.58 0.00
141_I 6_T 0.58 0.00
5_L 93_K 0.58 0.00
152_K 102_E 0.58 0.00
126_P 42_A 0.58 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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