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OPENSEQ.org
L03 - L19
UniProt: Q5SHN8 - P60490
Length: 352
Sequences: 1177
Seq/Len: 3.69
I_Prob: 0.82
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dET 3v2fETContact Map
2j002j01ET 2j03ETContact Map
4juw4juxETContact Map
4kix4kixDP 4kizDP 4kj1DP 4kj3DPContact Map
4kj54kj5DP 4kj7DP 4kj9DP 4kjbDPContact Map
2zjr2zjrBMContact Map
4btc4btdETContact Map
3uyd3uyeER 3uygERContact Map
4gd13r8sDP 3r8tDPContact Map
3ohc3ohjET 3ohkETContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
179_E 9_L 1.52 0.82
25_V 10_V 1.39 0.74
111_R 53_R 1.26 0.62
12_T 10_V 1.23 0.59
164_R 84_Q 0.99 0.35
183_L 6_L 0.98 0.34
18_D 111_R 0.95 0.31
99_G 39_R 0.93 0.28
179_E 10_V 0.87 0.23
13_R 58_N 0.82 0.19
47_V 11_E 0.82 0.19
76_R 28_V 0.81 0.18
172_V 10_V 0.79 0.17
179_E 11_E 0.77 0.15
72_V 34_V 0.75 0.14
3_G 112_R 0.75 0.14
149_R 27_T 0.73 0.13
153_G 68_Y 0.72 0.12
192_N 5_A 0.70 0.11
63_L 115_R 0.70 0.11
58_R 70_V 0.68 0.10
102_V 34_V 0.68 0.10
202_K 110_I 0.68 0.10
179_E 13_R 0.67 0.10
138_P 74_R 0.67 0.10
132_H 106_S 0.67 0.10
132_H 46_E 0.67 0.10
156_M 65_K 0.67 0.09
106_G 66_V 0.67 0.09
15_F 40_T 0.66 0.09
183_L 10_V 0.66 0.09
192_N 4_G 0.65 0.09
164_R 113_K 0.65 0.09
74_P 74_R 0.65 0.09
94_E 27_T 0.65 0.09
146_T 75_I 0.63 0.08
154_K 65_K 0.63 0.08
198_V 104_N 0.63 0.08
107_T 40_T 0.62 0.08
47_V 86_I 0.62 0.08
181_L 61_F 0.62 0.07
18_D 34_V 0.62 0.07
4_I 35_K 0.62 0.07
45_T 34_V 0.62 0.07
191_P 45_F 0.62 0.07
22_P 98_K 0.61 0.07
37_R 80_S 0.61 0.07
150_V 102_I 0.61 0.07
153_G 45_F 0.61 0.07
105_T 104_N 0.61 0.07
198_V 17_T 0.60 0.07
125_G 14_Y 0.60 0.07
53_P 40_T 0.60 0.07
174_D 13_R 0.60 0.07
142_G 100_Y 0.60 0.07
109_K 49_V 0.60 0.07
9_V 96_R 0.60 0.07
174_D 90_Q 0.59 0.07
9_V 6_L 0.59 0.06
194_G 51_R 0.59 0.06
57_K 108_R 0.58 0.06
168_M 50_I 0.58 0.06
177_P 28_V 0.58 0.06
89_D 31_S 0.58 0.06
181_L 10_V 0.58 0.06
109_K 35_K 0.58 0.06
14_I 104_N 0.58 0.06
104_V 68_Y 0.58 0.06
99_G 70_V 0.57 0.06
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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