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OPENSEQ.org
L03 - L33
UniProt: Q5SHN8 - P35871
Length: 260
Sequences: 1105
Seq/Len: 4.33
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dE6 3v2fE6Contact Map
2j002j01E6 2j03E6Contact Map
4juw4juxE6Contact Map
4kix4kixD1 4kizD1 4kj1D1 4kj3D1Contact Map
4kj54kj5D1 4kj7D1 4kj9D1 4kjbD1Contact Map
2zjr2zjrB1Contact Map
4btc4btdE6Contact Map
3uyd3uyeE6 3uygE6Contact Map
4gd13r8sD1 3r8tD1Contact Map
3knh3kniE6 3knkE6Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
143_N 33_K 0.98 0.01
198_V 11_L 0.81 0.01
181_L 53_K 0.78 0.01
128_S 54_I 0.74 0.01
67_F 17_K 0.74 0.01
194_G 39_Y 0.74 0.01
164_R 36_L 0.70 0.01
49_L 50_R 0.69 0.01
199_R 53_K 0.69 0.01
81_I 53_K 0.68 0.01
134_I 33_K 0.67 0.01
172_V 34_L 0.67 0.01
75_V 22_A 0.67 0.01
104_V 53_K 0.66 0.01
159_H 7_I 0.65 0.01
62_P 39_Y 0.65 0.01
68_A 24_E 0.60 0.00
145_K 33_K 0.59 0.00
173_V 39_Y 0.59 0.00
1_M 50_R 0.58 0.00
26_I 26_N 0.58 0.00
194_G 29_N 0.58 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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