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OPENSEQ.org

S10 - S17
UniProt: Q5SHN7 - Q5SHP7
Length: 210
Sequences: 1030
Seq/Len: 5.66
I_Prob: 0.05
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeJQContact Map
3v2c3v2cJQ 3v2eJQContact Map
2uub2uubJQContact Map
2j002j00JQ 2j02JQContact Map
3t1y3t1yJQContact Map
4juw4juwJQContact Map
2uua2uuaJQContact Map
4b3m4b3mJQContact Map
2uxc2uxcJQContact Map
4kix4kiyJQ 4kj0JQ 4kj2JQ 4kj4JQContact Map


Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
53_P 25_R 1.04 0.05
68_H 18_T 1.03 0.04
16_L 42_Y 0.93 0.03
96_I 6_L 0.90 0.03
7_K 15_M 0.88 0.03
28_R 27_F 0.86 0.03
8_L 41_K 0.81 0.02
97_E 44_A 0.77 0.02
14_K 81_R 0.77 0.02
38_I 81_R 0.76 0.02
16_L 1_M 0.76 0.02
46_R 22_L 0.75 0.02
12_D 79_S 0.74 0.02
49_V 82_M 0.74 0.02
6_I 59_I 0.73 0.02
56_H 67_K 0.70 0.01
53_P 26_Q 0.69 0.01
16_L 18_T 0.69 0.01
93_G 42_Y 0.67 0.01
38_I 61_E 0.67 0.01
53_P 31_L 0.67 0.01
63_F 42_Y 0.67 0.01
92_T 28_P 0.66 0.01
59_S 72_R 0.66 0.01
28_R 37_K 0.65 0.01
92_T 71_F 0.65 0.01
49_V 60_I 0.65 0.01
64_E 61_E 0.65 0.01
58_D 3_K 0.64 0.01
43_R 18_T 0.63 0.01
51_R 61_E 0.62 0.01
53_P 68_R 0.62 0.01
11_F 81_R 0.61 0.01
32_A 58_E 0.61 0.01
38_I 33_G 0.61 0.01
66_R 19_V 0.61 0.01
45_R 40_K 0.60 0.01
49_V 54_G 0.60 0.01
21_Q 65_I 0.59 0.01
92_T 38_R 0.59 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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