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OPENSEQ.org

S10 - S19
UniProt: Q5SHN7 - Q5SHP2
Length: 198
Sequences: 887
Seq/Len: 4.64
I_Prob: 0.62
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeJSContact Map
3v2c3v2cJS 3v2eJSContact Map
2uub2uubJSContact Map
2j002j00JS 2j02JSContact Map
3t1y3t1yJSContact Map
4juw4juwJSContact Map
2uua2uuaJSContact Map
4b3m4b3mJSContact Map
2uxc2uxcJSContact Map
4kix4kiyJS 4kj0JS 4kj2JS 4kj4JSContact Map


Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
72_V 40_I 1.36 0.62
58_D 57_H 1.31 0.57
53_P 41_V 1.11 0.38
33_Q 44_M 1.02 0.30
48_T 65_N 1.01 0.29
25_E 49_I 0.98 0.26
50_I 2_P 0.97 0.26
79_R 30_L 0.95 0.24
96_I 84_G 0.94 0.23
6_I 66_M 0.92 0.22
69_N 45_V 0.92 0.22
79_R 56_Q 0.91 0.21
80_K 32_K 0.90 0.20
20_A 84_G 0.88 0.19
91_P 61_Y 0.86 0.17
33_Q 26_G 0.85 0.17
53_P 62_I 0.84 0.17
35_S 87_A 0.84 0.16
53_P 89_A 0.83 0.16
28_R 2_P 0.83 0.16
80_K 57_H 0.82 0.15
91_P 2_P 0.82 0.15
79_R 25_K 0.81 0.15
16_L 85_K 0.81 0.14
97_E 44_M 0.81 0.14
69_N 27_E 0.80 0.14
16_L 90_T 0.79 0.14
47_F 16_L 0.79 0.14
58_D 44_M 0.79 0.14
21_Q 58_V 0.79 0.14
7_K 57_H 0.79 0.13
76_N 45_V 0.78 0.13
86_M 62_I 0.78 0.13
53_P 16_L 0.77 0.12
72_V 87_A 0.77 0.12
91_P 27_E 0.77 0.12
3_K 45_V 0.77 0.12
54_F 35_S 0.76 0.12
20_A 21_E 0.76 0.12
53_P 2_P 0.75 0.11
65_L 84_G 0.75 0.11
50_I 53_N 0.74 0.11
57_K 6_K 0.74 0.11
16_L 14_H 0.74 0.11
47_F 33_T 0.73 0.10
16_L 87_A 0.73 0.10
52_G 35_S 0.73 0.10
52_G 78_R 0.73 0.10
45_R 52_Y 0.72 0.10
40_L 69_H 0.72 0.10
51_R 2_P 0.71 0.09
16_L 26_G 0.70 0.09
84_Q 88_K 0.70 0.09
16_L 31_I 0.70 0.09
34_V 22_L 0.69 0.09
44_V 60_V 0.69 0.09
84_Q 10_F 0.69 0.08
65_L 89_A 0.68 0.08
16_L 88_K 0.68 0.08
79_R 86_E 0.68 0.08
83_E 13_D 0.68 0.08
56_H 25_K 0.68 0.08
6_I 69_H 0.68 0.08
62_H 65_N 0.68 0.08
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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