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OPENSEQ.org
S12 - S15
UniProt: Q5SHN3 - Q5SJ76
Length: 221
Sequences: 993
Seq/Len: 4.64
I_Prob: 0.83
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeLOContact Map
3v2c3v2cLO 3v2eLOContact Map
2uub2uubLOContact Map
2j002j00LO 2j02LOContact Map
3t1y3t1yLOContact Map
4juw4juwLOContact Map
2uua2uuaLOContact Map
4b3m4b3mLOContact Map
2uxc2uxcLOContact Map
4kix4kiyLO 4kj0LO 4kj2LO 4kj4LOContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
11_G 61_G 1.50 0.83
52_V 35_R 1.36 0.74
108_K 5_K 1.22 0.62
53_A 40_S 1.16 0.56
101_V 18_F 1.09 0.49
22_P 27_V 1.08 0.47
97_I 61_G 1.01 0.40
33_V 32_L 0.96 0.35
121_K 68_R 0.95 0.33
30_R 54_R 0.93 0.32
21_V 5_K 0.93 0.32
36_V 43_L 0.91 0.30
38_R 35_R 0.87 0.26
113_S 50_H 0.86 0.25
94_R 54_R 0.85 0.24
19_S 65_R 0.81 0.21
80_V 25_T 0.78 0.18
53_A 35_R 0.78 0.18
40_V 2_P 0.77 0.17
52_V 59_M 0.73 0.15
121_K 41_E 0.73 0.15
30_R 58_M 0.72 0.14
97_I 43_L 0.72 0.14
15_V 89_G 0.70 0.13
119_T 73_E 0.70 0.13
34_C 60_V 0.70 0.13
105_A 10_K 0.70 0.13
105_A 4_T 0.69 0.12
58_T 53_H 0.69 0.12
122_P 48_K 0.68 0.12
40_V 35_R 0.68 0.12
40_V 68_R 0.68 0.11
108_K 9_Q 0.67 0.11
5_N 89_G 0.67 0.11
56_R 6_E 0.67 0.11
101_V 89_G 0.66 0.11
29_F 46_H 0.66 0.10
14_K 9_Q 0.66 0.10
16_R 13_Q 0.66 0.10
5_N 87_I 0.65 0.10
61_Y 9_Q 0.65 0.10
26_G 45_V 0.64 0.10
98_V 37_N 0.64 0.09
54_K 3_I 0.64 0.09
124_E 34_L 0.63 0.09
104_A 79_R 0.63 0.09
22_P 12_I 0.63 0.09
98_V 41_E 0.63 0.09
8_V 79_R 0.62 0.09
49_L 55_G 0.62 0.09
104_A 17_R 0.62 0.08
29_F 44_K 0.61 0.08
65_A 17_R 0.61 0.08
109_D 71_Q 0.61 0.08
70_E 68_R 0.61 0.08
19_S 70_L 0.61 0.08
107_V 8_K 0.61 0.08
109_D 68_R 0.60 0.08
24_L 9_Q 0.60 0.08
66_Y 39_L 0.60 0.08
15_V 2_P 0.60 0.08
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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