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OPENSEQ.org
S12 - S20
UniProt: Q5SHN3 - P80380
Length: 238
Sequences: 956
Seq/Len: 4.53
I_Prob: 0.08
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeLTContact Map
3v2c3v2cLT 3v2eLTContact Map
2uub2uubLTContact Map
2j002j00LT 2j02LTContact Map
3t1y3t1yLTContact Map
4juw4juwLTContact Map
2uua2uuaLTContact Map
4b3m4b3mLTContact Map
2uxc2uxcLTContact Map
4kix4kiyLT 4kj0LT 4kj2LT 4kj4LTContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
122_P 38_K 1.10 0.08
70_E 40_A 1.02 0.06
111_K 78_A 0.98 0.06
11_G 89_R 0.90 0.04
81_L 69_G 0.88 0.04
113_S 92_L 0.88 0.04
122_P 12_A 0.88 0.04
105_A 83_R 0.88 0.04
34_C 8_R 0.87 0.04
119_T 53_L 0.83 0.03
96_H 29_K 0.83 0.03
27_A 89_R 0.83 0.03
102_Y 85_M 0.82 0.03
35_T 35_T 0.82 0.03
61_Y 59_A 0.81 0.03
27_A 9_N 0.81 0.03
116_K 77_A 0.81 0.03
98_V 77_A 0.81 0.03
10_K 72_L 0.81 0.03
119_T 38_K 0.79 0.03
65_A 18_Q 0.79 0.03
36_V 28_A 0.79 0.03
79_V 79_R 0.78 0.03
121_K 24_L 0.76 0.03
79_V 41_I 0.75 0.03
59_S 36_L 0.74 0.02
82_I 58_K 0.74 0.02
65_A 81_K 0.74 0.02
64_T 66_A 0.74 0.02
64_T 64_D 0.74 0.02
116_K 12_A 0.72 0.02
119_T 42_Q 0.72 0.02
98_V 73_H 0.71 0.02
13_E 88_V 0.71 0.02
20_K 76_A 0.71 0.02
106_G 84_L 0.70 0.02
65_A 15_R 0.70 0.02
113_S 33_I 0.69 0.02
96_H 76_A 0.68 0.02
53_A 32_A 0.68 0.02
70_E 17_R 0.68 0.02
4_I 15_R 0.68 0.02
13_E 58_K 0.68 0.02
26_G 70_S 0.68 0.02
9_R 77_A 0.68 0.02
8_V 90_Q 0.67 0.02
22_P 30_K 0.67 0.02
59_S 68_K 0.66 0.02
5_N 83_R 0.66 0.02
80_V 66_A 0.65 0.02
109_D 8_R 0.65 0.02
105_A 47_G 0.65 0.02
81_L 16_H 0.64 0.02
11_G 86_R 0.64 0.02
30_R 13_L 0.64 0.02
36_V 65_K 0.64 0.02
5_N 36_L 0.62 0.01
5_N 27_K 0.62 0.01
53_A 66_A 0.62 0.01
93_V 72_L 0.61 0.01
11_G 91_L 0.61 0.01
101_V 56_M 0.61 0.01
58_T 55_I 0.61 0.01
119_T 46_E 0.61 0.01
124_E 80_R 0.60 0.01
59_S 41_I 0.60 0.01
65_A 30_K 0.60 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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