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OPENSEQ.org
S12 - S13
UniProt: Q5SHN3 - P80377
Length: 258
Sequences: 962
Seq/Len: 3.88
I_Prob: 0.95
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeLMContact Map
3v2c3v2cLM 3v2eLMContact Map
2uub2uubLMContact Map
2j002j00LM 2j02LMContact Map
3t1y3t1yLMContact Map
4juw4juwLMContact Map
2uua2uuaLMContact Map
4b3m4b3mLMContact Map
2uxc2uxcLMContact Map
4kix4kiyLM 4kj0LM 4kj2LM 4kj4LMContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
65_A 84_I 1.77 0.95
64_T 119_G 1.20 0.69
58_T 118_A 1.20 0.69
15_V 18_A 1.19 0.68
70_E 75_A 1.17 0.66
30_R 123_A 1.03 0.51
79_V 81_L 1.01 0.49
10_K 104_R 0.99 0.46
26_G 18_A 0.98 0.46
13_E 66_L 0.95 0.42
25_K 37_T 0.92 0.38
113_S 64_W 0.92 0.38
58_T 121_K 0.91 0.37
21_V 8_E 0.91 0.37
36_V 85_G 0.89 0.34
64_T 105_T 0.88 0.33
109_D 38_G 0.86 0.32
26_G 119_G 0.85 0.30
14_K 39_I 0.85 0.30
70_E 83_D 0.84 0.29
54_K 20_T 0.83 0.28
79_V 113_P 0.82 0.27
16_R 35_E 0.81 0.26
19_S 111_K 0.81 0.26
15_V 118_A 0.79 0.24
36_V 82_M 0.79 0.24
70_E 5_A 0.78 0.23
20_K 18_A 0.78 0.23
88_K 79_K 0.78 0.23
25_K 82_M 0.78 0.23
81_L 73_E 0.77 0.22
8_V 37_T 0.77 0.22
21_V 99_R 0.76 0.22
36_V 18_A 0.76 0.22
122_P 79_K 0.76 0.21
104_A 118_A 0.75 0.21
58_T 34_L 0.75 0.20
15_V 62_N 0.75 0.20
64_T 61_E 0.74 0.20
70_E 61_E 0.74 0.19
79_V 75_A 0.74 0.19
20_K 9_I 0.74 0.19
105_A 45_V 0.73 0.19
16_R 36_K 0.73 0.19
94_R 73_E 0.73 0.19
65_A 76_A 0.73 0.18
11_G 118_A 0.72 0.18
18_K 114_R 0.72 0.18
17_K 58_E 0.72 0.18
105_A 36_K 0.72 0.18
119_T 35_E 0.72 0.18
20_K 43_T 0.71 0.17
58_T 75_A 0.71 0.17
93_V 23_Y 0.71 0.17
70_E 85_G 0.71 0.17
113_S 121_K 0.71 0.17
88_K 111_K 0.70 0.17
56_R 81_L 0.70 0.17
109_D 53_V 0.69 0.16
21_V 18_A 0.69 0.16
122_P 88_R 0.69 0.15
97_I 44_R 0.69 0.15
96_H 105_T 0.69 0.15
57_L 88_R 0.69 0.15
86_R 6_G 0.68 0.15
95_Y 19_L 0.68 0.15
113_S 59_Y 0.68 0.15
96_H 76_A 0.68 0.15
109_D 62_N 0.68 0.14
113_S 114_R 0.68 0.14
36_V 65_K 0.68 0.14
58_T 123_A 0.67 0.14
113_S 54_V 0.67 0.14
109_D 18_A 0.67 0.14
98_V 93_R 0.67 0.14
101_V 104_R 0.67 0.14
98_V 90_L 0.67 0.14
101_V 105_T 0.66 0.14
106_G 78_I 0.66 0.13
109_D 54_V 0.66 0.13
68_P 14_R 0.66 0.13
40_V 18_A 0.66 0.13
61_Y 46_K 0.66 0.13
122_P 81_L 0.66 0.13
105_A 105_T 0.66 0.13
29_F 60_V 0.65 0.13
59_S 111_K 0.65 0.13
64_T 80_R 0.65 0.13
22_P 87_Y 0.65 0.13
14_K 62_N 0.65 0.12
5_N 123_A 0.65 0.12
5_N 48_L 0.65 0.12
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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