| UniProt: | Q56223 - Q60019 |
Query Sequences: |
Download Alignment We filter this alignment to remove positions that have > 75% gaps before running GREMLIN. |
| Length: | 1148 | ||
| Sequences: | 1653 | ||
| Seq/Len: | 1.61 | ||
| I_Prob: | 0.00 |
Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
| 4hea | 3D:HQ:9O | Contact Map |
| i | j | Scaled Score | I_Prob |
| 413_L | 26_T | 0.92 | 0.00 |
| 577_L | 88_I | 0.83 | 0.00 |
| 408_I | 67_I | 0.80 | 0.00 |
| 481_L | 57_L | 0.77 | 0.00 |
| 326_F | 152_S | 0.76 | 0.00 |
| 408_I | 57_L | 0.76 | 0.00 |
| 621_V | 124_Y | 0.75 | 0.00 |
| 328_A | 260_P | 0.74 | 0.00 |
| 497_W | 180_L | 0.74 | 0.00 |
| 472_E | 95_L | 0.73 | 0.00 |
| 576_A | 281_L | 0.73 | 0.00 |
| 331_E | 64_I | 0.73 | 0.00 |
| 255_T | 290_F | 0.73 | 0.00 |
| 578_K | 88_I | 0.73 | 0.00 |
| 320_A | 34_I | 0.72 | 0.00 |
| 365_K | 117_N | 0.71 | 0.00 |
| 505_L | 136_I | 0.68 | 0.00 |
| 342_G | 102_F | 0.68 | 0.00 |
| 321_T | 207_L | 0.68 | 0.00 |
| 594_A | 281_L | 0.67 | 0.00 |
| 664_L | 178_G | 0.67 | 0.00 |
| 386_S | 179_S | 0.67 | 0.00 |
| 333_L | 284_A | 0.67 | 0.00 |
Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)
Text file of predictions (includes both intra and inter preds)