| UniProt: | Q56223 - Q56219 |
Query Sequences: |
Download Alignment We filter this alignment to remove positions that have > 75% gaps before running GREMLIN. |
| Length: | 990 | ||
| Sequences: | 1688 | ||
| Seq/Len: | 1.97 | ||
| I_Prob: | 0.00 |
Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
| 3ias | 3UCL:5NEW:4DVM:9YGP | Contact Map |
| 3i9v | 3C:5E:4D:9G | Contact Map |
| 2fug | 3CLU:5NEW:4VMD:9YPG | Contact Map |
| 3m9s | 3C:5E:4D:9G | Contact Map |
| 3iam | 3C:5E:4D:9G | Contact Map |
| 4hea | 3D:5F:4E:9O | Contact Map |
| 2ybb | 3:5:4:8 | Contact Map |
| i | j | Scaled Score | I_Prob |
| 357_A | 107_L | 0.96 | 0.00 |
| 387_L | 104_V | 0.90 | 0.00 |
| 583_V | 88_F | 0.86 | 0.00 |
| 311_V | 107_L | 0.83 | 0.00 |
| 343_L | 103_T | 0.81 | 0.00 |
| 654_F | 68_F | 0.78 | 0.00 |
| 492_K | 119_Y | 0.77 | 0.00 |
| 612_G | 122_F | 0.76 | 0.00 |
| 336_A | 27_V | 0.76 | 0.00 |
| 326_F | 90_V | 0.76 | 0.00 |
| 278_R | 122_F | 0.75 | 0.00 |
| 484_K | 29_L | 0.74 | 0.00 |
| 568_Y | 107_L | 0.74 | 0.00 |
| 399_L | 104_V | 0.74 | 0.00 |
| 324_E | 105_T | 0.74 | 0.00 |
| 392_Q | 32_E | 0.72 | 0.00 |
| 341_V | 105_T | 0.72 | 0.00 |
| 408_I | 110_S | 0.70 | 0.00 |
| 408_I | 146_L | 0.69 | 0.00 |
| 314_E | 128_G | 0.68 | 0.00 |
| 395_F | 104_V | 0.68 | 0.00 |
| 496_A | 34_F | 0.67 | 0.00 |
| 498_E | 88_F | 0.67 | 0.00 |
| 506_I | 92_V | 0.67 | 0.00 |
| 456_A | 31_R | 0.67 | 0.00 |
| 584_V | 142_E | 0.66 | 0.00 |
| 634_A | 90_V | 0.66 | 0.00 |
| 475_E | 121_L | 0.66 | 0.00 |
| 592_P | 72_Y | 0.65 | 0.00 |
| 518_A | 127_E | 0.65 | 0.00 |
| 353_E | 121_L | 0.65 | 0.00 |
| 584_V | 35_K | 0.65 | 0.00 |
| 329_L | 90_V | 0.65 | 0.00 |
| 659_E | 103_T | 0.64 | 0.00 |
| 380_S | 54_G | 0.64 | 0.00 |
| 365_K | 110_S | 0.64 | 0.00 |
| 341_V | 70_V | 0.64 | 0.00 |
| 262_G | 54_G | 0.64 | 0.00 |
| 668_K | 29_L | 0.64 | 0.00 |
| 326_F | 41_Y | 0.63 | 0.00 |
| 480_L | 107_L | 0.63 | 0.00 |
| 644_L | 27_V | 0.62 | 0.00 |
Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)
Text file of predictions (includes both intra and inter preds)