| UniProt: | Q56222 - Q56227 |
Query Sequences: |
Download Alignment We filter this alignment to remove positions that have > 75% gaps before running GREMLIN. |
| Length: | 1044 | ||
| Sequences: | 1286 | ||
| Seq/Len: | 1.27 | ||
| I_Prob: | 0.00 |
Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
| 4hea | 1B:LT:MU:NV | Contact Map |
| i | j | Scaled Score | I_Prob |
| 388_E | 188_L | 0.87 | 0.00 |
| 313_Y | 67_L | 0.87 | 0.00 |
| 54_I | 148_N | 0.85 | 0.00 |
| 251_L | 125_P | 0.82 | 0.00 |
| 225_A | 259_L | 0.79 | 0.00 |
| 414_L | 128_F | 0.75 | 0.00 |
| 268_M | 349_V | 0.73 | 0.00 |
| 118_M | 172_G | 0.72 | 0.00 |
| 290_I | 372_A | 0.71 | 0.00 |
| 173_V | 121_A | 0.70 | 0.00 |
| 273_R | 256_S | 0.70 | 0.00 |
| 378_Q | 184_S | 0.70 | 0.00 |
| 263_V | 373_L | 0.70 | 0.00 |
| 52_E | 202_L | 0.69 | 0.00 |
Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)
Text file of predictions (includes both intra and inter preds)