| UniProt: | Q56222 - Q56226 |
Query Sequences: |
Download Alignment We filter this alignment to remove positions that have > 75% gaps before running GREMLIN. |
| Length: | 533 | ||
| Sequences: | 999 | ||
| Seq/Len: | 1.97 | ||
| I_Prob: | 0.01 |
Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
| 4hea | 1B:KS | Contact Map |
| i | j | Scaled Score | I_Prob |
| 121_A | 79_F | 1.17 | 0.01 |
| 171_L | 58_L | 1.03 | 0.01 |
| 186_T | 28_F | 0.80 | 0.00 |
| 80_P | 42_L | 0.80 | 0.00 |
| 143_D | 37_A | 0.79 | 0.00 |
| 273_R | 54_Q | 0.78 | 0.00 |
| 57_V | 89_D | 0.77 | 0.00 |
| 373_K | 63_V | 0.77 | 0.00 |
| 325_T | 54_Q | 0.75 | 0.00 |
| 238_F | 74_L | 0.74 | 0.00 |
| 81_K | 30_S | 0.73 | 0.00 |
| 276_I | 70_V | 0.73 | 0.00 |
| 131_Y | 62_A | 0.72 | 0.00 |
| 233_R | 30_S | 0.71 | 0.00 |
| 330_L | 75_I | 0.70 | 0.00 |
| 290_I | 33_L | 0.70 | 0.00 |
| 232_E | 9_L | 0.69 | 0.00 |
| 170_D | 75_I | 0.68 | 0.00 |
| 114_L | 24_A | 0.67 | 0.00 |
| 308_D | 10_L | 0.67 | 0.00 |
| 201_L | 57_A | 0.67 | 0.00 |
| 33_L | 9_L | 0.67 | 0.00 |
| 315_H | 30_S | 0.67 | 0.00 |
Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)
Text file of predictions (includes both intra and inter preds)