| UniProt: | Q56222 - Q56220 |
Query Sequences: |
Download Alignment We filter this alignment to remove positions that have > 75% gaps before running GREMLIN. |
| Length: | 847 | ||
| Sequences: | 1244 | ||
| Seq/Len: | 1.55 | ||
| I_Prob: | 0.00 |
Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
| 3ias | 1SJA:4DVM | Contact Map |
| 3i9v | 1A:4D | Contact Map |
| 2fug | 1SAJ:4VMD | Contact Map |
| 3m9s | 1A:4D | Contact Map |
| 4hea | 1B:4E | Contact Map |
| 3iam | 1A:4D | Contact Map |
| 2ybb | 1:4 | Contact Map |
| i | j | Scaled Score | I_Prob |
| 336_S | 52_V | 0.96 | 0.00 |
| 107_L | 291_K | 0.82 | 0.00 |
| 394_I | 193_L | 0.80 | 0.00 |
| 171_L | 159_L | 0.80 | 0.00 |
| 284_L | 261_T | 0.74 | 0.00 |
| 276_I | 187_V | 0.73 | 0.00 |
| 346_R | 194_L | 0.72 | 0.00 |
| 50_P | 244_V | 0.71 | 0.00 |
| 192_L | 106_G | 0.70 | 0.00 |
| 384_V | 47_L | 0.69 | 0.00 |
| 232_E | 357_I | 0.69 | 0.00 |
| 115_I | 234_L | 0.68 | 0.00 |
Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)
Text file of predictions (includes both intra and inter preds)