| UniProt: | Q56220 - Q56228 |
Query Sequences: |
Download Alignment We filter this alignment to remove positions that have > 75% gaps before running GREMLIN. |
| Length: | 878 | ||
| Sequences: | 1559 | ||
| Seq/Len: | 1.84 | ||
| I_Prob: | 0.00 |
Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
| 4hea | 4E:MU:LT:NV | Contact Map |
| i | j | Scaled Score | I_Prob |
| 126_L | 112_A | 0.99 | 0.00 |
| 106_G | 259_L | 0.96 | 0.00 |
| 107_A | 399_V | 0.88 | 0.00 |
| 232_L | 363_L | 0.88 | 0.00 |
| 109_V | 344_Y | 0.83 | 0.00 |
| 201_I | 78_I | 0.82 | 0.00 |
| 244_V | 363_L | 0.81 | 0.00 |
| 134_G | 91_V | 0.79 | 0.00 |
| 48_S | 323_G | 0.75 | 0.00 |
| 192_K | 161_A | 0.73 | 0.00 |
| 103_K | 394_L | 0.73 | 0.00 |
| 294_L | 120_V | 0.71 | 0.00 |
| 103_K | 11_V | 0.71 | 0.00 |
| 280_I | 441_L | 0.70 | 0.00 |
| 342_V | 186_Q | 0.69 | 0.00 |
Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)
Text file of predictions (includes both intra and inter preds)