| UniProt: | Q56220 - Q56227 |
Query Sequences: |
Download Alignment We filter this alignment to remove positions that have > 75% gaps before running GREMLIN. |
| Length: | 1015 | ||
| Sequences: | 1562 | ||
| Seq/Len: | 1.58 | ||
| I_Prob: | 0.01 |
Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
| 4hea | LT:4E:MU:NV | Contact Map |
| i | j | Scaled Score | I_Prob |
| 201_I | 336_S | 1.20 | 0.01 |
| 220_G | 455_L | 0.91 | 0.00 |
| 134_G | 369_G | 0.84 | 0.00 |
| 149_A | 80_V | 0.83 | 0.00 |
| 149_A | 286_F | 0.81 | 0.00 |
| 168_F | 136_L | 0.79 | 0.00 |
| 193_L | 352_M | 0.79 | 0.00 |
| 210_E | 275_L | 0.77 | 0.00 |
| 221_V | 16_L | 0.76 | 0.00 |
| 261_T | 379_L | 0.76 | 0.00 |
| 397_I | 453_S | 0.76 | 0.00 |
| 241_A | 259_L | 0.76 | 0.00 |
| 222_G | 47_L | 0.73 | 0.00 |
| 290_I | 69_L | 0.73 | 0.00 |
| 52_V | 171_L | 0.72 | 0.00 |
| 118_V | 304_G | 0.70 | 0.00 |
| 163_V | 282_A | 0.70 | 0.00 |
| 112_R | 90_Y | 0.70 | 0.00 |
| 98_A | 67_L | 0.70 | 0.00 |
| 258_E | 176_L | 0.70 | 0.00 |
| 150_F | 184_S | 0.70 | 0.00 |
| 97_Y | 369_G | 0.69 | 0.00 |
| 93_H | 221_P | 0.69 | 0.00 |
| 89_H | 393_L | 0.68 | 0.00 |
| 233_G | 339_V | 0.68 | 0.00 |
| 222_G | 40_S | 0.68 | 0.00 |
| 171_N | 382_F | 0.68 | 0.00 |
Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)
Text file of predictions (includes both intra and inter preds)