| UniProt: | Q56220 - Q56224 |
Query Sequences: |
Download Alignment We filter this alignment to remove positions that have > 75% gaps before running GREMLIN. |
| Length: | 591 | ||
| Sequences: | 1603 | ||
| Seq/Len: | 3.01 | ||
| I_Prob: | 0.01 |
Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
| 3ias | 4DVM:9YGP:3UCL | Contact Map |
| 3i9v | 4D:9G:3C | Contact Map |
| 3m9s | 4D:9G:3C | Contact Map |
| 2fug | 4VMD:9YPG:3CLU | Contact Map |
| 4hea | 4E:9O:3D | Contact Map |
| 3iam | 4D:9G:3C | Contact Map |
| 2ybb | 4:8:3 | Contact Map |
| i | j | Scaled Score | I_Prob |
| 59_I | 113_I | 1.01 | 0.01 |
| 180_E | 36_R | 0.86 | 0.01 |
| 206_A | 12_I | 0.85 | 0.01 |
| 171_N | 103_L | 0.80 | 0.01 |
| 203_E | 19_S | 0.78 | 0.00 |
| 97_Y | 103_L | 0.72 | 0.00 |
| 242_S | 116_G | 0.71 | 0.00 |
| 174_R | 106_E | 0.69 | 0.00 |
| 194_L | 90_V | 0.65 | 0.00 |
| 73_R | 67_A | 0.64 | 0.00 |
| 178_V | 66_Y | 0.63 | 0.00 |
Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)
Text file of predictions (includes both intra and inter preds)