| UniProt: | Q56218 - Q56227 |
Query Sequences: |
Download Alignment We filter this alignment to remove positions that have > 75% gaps before running GREMLIN. |
| Length: | 787 | ||
| Sequences: | 1547 | ||
| Seq/Len: | 2.04 | ||
| I_Prob: | 0.00 |
Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
| 4hea | LT:6G:MU:NV | Contact Map |
| i | j | Scaled Score | I_Prob |
| 103_K | 260_Y | 0.86 | 0.00 |
| 150_A | 336_S | 0.83 | 0.00 |
| 100_P | 251_Y | 0.81 | 0.00 |
| 106_I | 277_T | 0.80 | 0.00 |
| 148_I | 323_F | 0.80 | 0.00 |
| 54_T | 220_I | 0.77 | 0.00 |
| 148_I | 99_P | 0.75 | 0.00 |
| 80_V | 305_Y | 0.74 | 0.00 |
| 75_A | 113_A | 0.73 | 0.00 |
| 150_A | 271_A | 0.72 | 0.00 |
| 88_M | 277_T | 0.72 | 0.00 |
| 114_S | 169_F | 0.71 | 0.00 |
| 144_P | 295_V | 0.71 | 0.00 |
| 36_L | 332_L | 0.69 | 0.00 |
Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)
Text file of predictions (includes both intra and inter preds)